Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   SNAG_RS01630 Genome accession   NZ_AP017652
Coordinates   286292..287329 (+) Length   345 a.a.
NCBI ID   WP_057489243.1    Uniprot ID   A0A1X1GNB9
Organism   Streptococcus sp. NPS 308     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 281292..292329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SNAG_RS01595 (SNAG_0320) yidC 281327..282256 (-) 930 WP_096408803.1 membrane protein insertase YidC -
  SNAG_RS01600 (SNAG_0321) - 282334..282612 (-) 279 WP_001174609.1 acylphosphatase -
  SNAG_RS01605 (SNAG_0322) - 282646..283386 (+) 741 WP_096405989.1 RNA methyltransferase -
  SNAG_RS01610 (SNAG_0323) - 283441..284124 (+) 684 WP_096405991.1 Bax inhibitor-1/YccA family protein -
  SNAG_RS01615 (SNAG_0324) asnA 284234..285226 (+) 993 WP_061852938.1 aspartate--ammonia ligase -
  SNAG_RS01620 (SNAG_0325) rsmD 285291..285830 (+) 540 WP_096405992.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SNAG_RS01625 (SNAG_0326) coaD 285820..286308 (+) 489 WP_096405994.1 pantetheine-phosphate adenylyltransferase -
  SNAG_RS01630 (SNAG_0327) sepM 286292..287329 (+) 1038 WP_057489243.1 SepM family pheromone-processing serine protease Regulator
  SNAG_RS01635 - 287385..287615 (+) 231 WP_009444432.1 DUF1146 family protein -
  SNAG_RS01640 (SNAG_0328) murA 287639..288922 (+) 1284 WP_096405995.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  SNAG_RS01645 (SNAG_0329) - 288909..289103 (+) 195 WP_000739700.1 DNA-directed RNA polymerase subunit beta -
  SNAG_RS01650 (SNAG_0330) endA 289144..289968 (+) 825 WP_096405997.1 DNA/RNA non-specific endonuclease Machinery gene
  SNAG_RS01655 (SNAG_0331) - 290109..291440 (+) 1332 WP_096405998.1 hemolysin family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37525.72 Da        Isoelectric Point: 5.5304

>NTDB_id=68330 SNAG_RS01630 WP_057489243.1 286292..287329(+) (sepM) [Streptococcus sp. NPS 308]
MKKKTRWPLYVILALVLTFLAFVVPLPYYIEVPGGAEDIRRVLKVNETEDTEAGAYQFVTVGIRHATLSHLVYAWLTPFT
DIRSAKETTGGSTDAEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNIADTVTAVNDKTF
DSSKDLVDYVNSQQLGDTVKVTYEEDGKVKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVAASRQGANVFFAPDNPVTEEAKKADPNAKSNYETALEAAK
TIKTEMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=68330 SNAG_RS01630 WP_057489243.1 286292..287329(+) (sepM) [Streptococcus sp. NPS 308]
ATGAAGAAAAAAACTAGATGGCCCTTATATGTCATCCTAGCACTAGTATTGACTTTTTTAGCCTTTGTAGTACCTTTACC
TTACTACATAGAAGTTCCAGGTGGAGCGGAAGATATTCGTCGCGTTTTGAAAGTCAATGAAACAGAAGACACAGAAGCAG
GAGCTTACCAGTTTGTAACAGTCGGCATTCGACACGCAACCCTGTCGCATCTGGTCTATGCTTGGTTAACACCTTTCACG
GATATTAGAAGTGCCAAGGAGACTACGGGTGGCTCTACTGACGCAGAATTTATGCGGATCAATCAGTTCTACATGCAAAC
TTCTCAAAATATGGCCAAGTATCAAGGACTGAAGACGGCTGGTAAGGATATCGAACTCAAGTACTTGGGAGTTTATGTCT
TAACTGTGACGGATAATTCGACTTTTAAAGGCATTCTGAACATTGCAGATACCGTGACGGCTGTTAATGACAAAACATTT
GACAGTTCAAAAGACTTGGTCGACTATGTCAATTCTCAACAATTAGGGGACACGGTCAAGGTAACCTATGAAGAAGACGG
AAAAGTCAAGTCTGCAGAAGGTAAAATTATCACTCTCGAAAACGGAAAAAACGGGATTGGGATTGGCTTGATTGACCGTA
CGGAAGTGACCAGTGACGTTCCAATTCGCTTTTCAACAGCTGGTATCGGCGGGCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTACACCCAGATAGCAGATCCAGGTCTTCGTAATGGCCGCATCGTTGCGGGAACGGGAACCATTGATCGGGACGG
AAATGTTGGCGACATTGGTGGAATTGACAAAAAAGTAGTTGCGGCCTCTCGTCAGGGAGCCAACGTCTTTTTTGCTCCTG
ACAATCCAGTCACCGAGGAAGCCAAAAAAGCAGATCCCAATGCGAAAAGTAACTATGAAACAGCCCTAGAAGCTGCTAAA
ACGATCAAGACAGAGATGAAAATCGTTCCCGTTAAGACCTTGCAGGATGCGATTGATTACCTTAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1X1GNB9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment