Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   OKW88_RS12580 Genome accession   NZ_CP110105
Coordinates   2455856..2456230 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain CF03     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2450856..2461230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKW88_RS12555 (OKW88_12535) - 2451020..2451181 (-) 162 WP_003227632.1 hypothetical protein -
  OKW88_RS12560 (OKW88_12540) glpX 2451396..2452361 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  OKW88_RS12565 (OKW88_12545) murAB 2452392..2453681 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  OKW88_RS12570 (OKW88_12550) fsa 2454060..2454698 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  OKW88_RS12575 (OKW88_12555) fbaA 2454818..2455675 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  OKW88_RS12580 (OKW88_12560) letA 2455856..2456230 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  OKW88_RS12585 (OKW88_12565) ywjG 2456396..2456917 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  OKW88_RS12590 (OKW88_12570) pyrG 2456999..2458606 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  OKW88_RS12595 (OKW88_12575) rpoE 2458848..2459369 (-) 522 WP_003227609.1 DNA-directed RNA polymerase subunit delta -
  OKW88_RS12600 (OKW88_12580) acdA 2459552..2460691 (-) 1140 WP_029318707.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=683099 OKW88_RS12580 WP_003227621.1 2455856..2456230(-) (letA) [Bacillus subtilis strain CF03]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=683099 OKW88_RS12580 WP_003227621.1 2455856..2456230(-) (letA) [Bacillus subtilis strain CF03]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTGTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363