Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OKW88_RS03315 Genome accession   NZ_CP110105
Coordinates   710021..710638 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain CF03     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 705021..715638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKW88_RS03285 (OKW88_03275) yndJ 705351..706991 (+) 1641 WP_342006609.1 YndJ family protein -
  OKW88_RS03290 (OKW88_03280) - 707069..707383 (+) 315 WP_201757448.1 hypothetical protein -
  OKW88_RS03295 (OKW88_03285) pghL 707607..708365 (+) 759 WP_119899451.1 gamma-polyglutamate hydrolase PghL -
  OKW88_RS03300 (OKW88_03290) - 708392..708841 (-) 450 WP_003245454.1 YndM family protein -
  OKW88_RS03305 (OKW88_03295) fosM 709049..709483 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  OKW88_RS03310 (OKW88_03300) - 709392..709734 (+) 343 Protein_661 hypothetical protein -
  OKW88_RS03315 (OKW88_03305) dinR/lexA 710021..710638 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  OKW88_RS03320 (OKW88_03310) yneA 710788..711105 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  OKW88_RS03325 (OKW88_03315) dinL 711124..711777 (+) 654 WP_015714011.1 recombinase family protein -
  OKW88_RS03330 (OKW88_03320) ynzC 711841..712074 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  OKW88_RS03335 (OKW88_03325) recP/tkt 712243..714246 (+) 2004 WP_014476936.1 transketolase Machinery gene
  OKW88_RS03340 (OKW88_03330) sirA 714399..714845 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  OKW88_RS03345 (OKW88_03335) yneF 714931..715149 (+) 219 WP_003221221.1 YneF family protein -
  OKW88_RS03350 (OKW88_03340) ynzD 715223..715396 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=683035 OKW88_RS03315 WP_003238209.1 710021..710638(-) (dinR/lexA) [Bacillus subtilis strain CF03]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=683035 OKW88_RS03315 WP_003238209.1 710021..710638(-) (dinR/lexA) [Bacillus subtilis strain CF03]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1