Detailed information NTG0682684

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: OHM48_RS08585
• Genome accession: NZ_CP109942
• Coordinates: 1726007..1728832 (-)
• Length: 941 a.a.
• NCBI ID: WP_012027732.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID35541
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1721007..1733832

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHM48_RS08560 (OHM48_08560)	-	1722352..1723317 (+)	966	WP_002938271.1	LacI family DNA-binding transcriptional regulator	-
OHM48_RS08565 (OHM48_08565)	nusB	1723397..1723816 (-)	420	WP_002938276.1	transcription antitermination factor NusB	-
OHM48_RS08570 (OHM48_08570)	-	1723806..1724198 (-)	393	WP_002942446.1	Asp23/Gls24 family envelope stress response protein	-
OHM48_RS08575 (OHM48_08575)	efp	1724226..1724783 (-)	558	WP_012775323.1	elongation factor P	-
OHM48_RS08580 (OHM48_08580)	-	1724847..1725908 (-)	1062	WP_012775324.1	Xaa-Pro peptidase family protein	-
OHM48_RS08585 (OHM48_08585)	uvrA	1726007..1728832 (-)	2826	WP_012027732.1	excinuclease ABC subunit UvrA	Machinery gene
OHM48_RS08590 (OHM48_08590)	-	1729336..1730280 (+)	945	WP_002939248.1	magnesium transporter CorA family protein	-
OHM48_RS08595 (OHM48_08595)	-	1730296..1730952 (+)	657	WP_012027735.1	DUF1129 domain-containing protein	-
OHM48_RS08600 (OHM48_08600)	rpsR	1731342..1731581 (-)	240	WP_002939250.1	30S ribosomal protein S18	-
OHM48_RS08605 (OHM48_08605)	ssbA	1731614..1732108 (-)	495	WP_002942409.1	single-stranded DNA-binding protein	Machinery gene
OHM48_RS08610 (OHM48_08610)	rpsF	1732120..1732410 (-)	291	WP_002942403.1	30S ribosomal protein S6	-
OHM48_RS08615 (OHM48_08615)	-	1732650..1733813 (+)	1164	WP_011922710.1	IS30 family transposase	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 103887.11 Da
• Isoelectric Point: 6.1800

>NTDB_id=682684 OHM48_RS08585 WP_012027732.1 1726007..1728832(-) (uvrA) [Streptococcus suis strain ID35541]
MQENIVIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIEGL
SPAISIDQKTTSRNPRSTVGTATEINDYLRLLYARVGVPYCINGHGAIAASSVEQIVDEVLELPERQRLQILAPIVRKKK
GQHKTIFEKIQKDGYVRVRVNGGVYDVSEVPELSKSKAHNIEVVVDRIVIKDGIRSRLFDSIEAALRIADGYVIIDTMDE
KEMLFSEYYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGMKLEVDTDLIVPDASKTLREGALAPWNPISSNYYPQML
EQAMNHFGVDMDKPFEELTEEEKNLIFNGSDGKEFHFHYENEFGGVRDIDIPFEGLITNINRRYRETNSDYTRTVMKTYM
NELTCGTCHGYRLNDQALSVKVGGEQGLHIGQLSDLSVADHLQVIEHLTLSENEATIATPIVKEIKDRLSFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTLIVVEHDEDTMREADWLI
DIGPGAGVFGGEIVASGTPAQVAKNKKSITGQYLSGKREIPVPLERRVGNGRFLEVTGAKENNLQDVTVRFPLGKFVAVT
GVSGSGKSTLVNSILKKAIAQKLNRNSDKPGKFKSISGIEHLDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVFVPCEVCHGHRYNSETLEVHYKEKNIAQVLDMTVNDAVEFF
KHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSLYILDEPTTGLHTEDIAQLLKVLARFVD
DGNTVLVIEHNLDVIKTADHIIDMGPEGGVGGGTVVATGTPEEVAENPASFTGQYLKMKLK

Nucleotide

• Length: 2826 bp

>NTDB_id=682684 OHM48_RS08585 WP_012027732.1 1726007..1728832(-) (uvrA) [Streptococcus suis strain ID35541]
ATGCAAGAAAATATTGTGATTCATGGGGCGCGTGCCCATAATTTGAAAAATATTGATGTGACCATTCCGCGTGAGAAGCT
GGTGGTGGTGACTGGTTTGTCGGGGTCTGGTAAGTCGAGTTTGGCTTTCGATACCTTGTATGCCGAGGGTCAACGTCGCT
ATGTGGAGTCTTTGTCTGCCTATGCTCGTCAGTTCTTGGGCAACATGGACAAGCCTGATGTGGATTCCATAGAGGGTCTC
AGCCCTGCTATTTCCATTGACCAAAAAACCACATCGCGGAATCCGCGTTCGACAGTCGGTACAGCGACGGAAATCAATGA
CTATCTCCGCTTGCTTTATGCTCGGGTTGGGGTACCTTACTGTATCAATGGCCACGGAGCGATTGCGGCTTCTTCGGTGG
AACAAATCGTTGATGAGGTCTTGGAATTGCCAGAACGCCAACGTTTGCAGATTCTAGCTCCGATTGTTCGTAAGAAAAAG
GGGCAACACAAGACCATTTTTGAGAAAATCCAGAAGGACGGCTATGTTCGGGTACGTGTCAATGGCGGTGTCTATGATGT
GTCGGAAGTACCAGAATTGTCCAAGAGCAAGGCTCATAATATTGAAGTTGTGGTCGATCGGATTGTGATCAAAGATGGCA
TTCGCTCGCGGCTTTTTGACTCCATTGAGGCGGCCCTGCGGATTGCGGACGGCTATGTCATCATCGACACCATGGATGAG
AAGGAAATGCTTTTCTCTGAGTACTATGCCTGCCCAGTTTGTGGTTTTACGGTACCAGAGTTGGAGCCTCGCCTCTTCTC
TTTCAATGCTCCTTTTGGGTCTTGTAGCGACTGTGACGGTTTGGGCATGAAGCTGGAAGTGGATACGGATTTGATTGTCC
CAGATGCCAGCAAGACCTTGCGTGAAGGTGCCTTGGCTCCTTGGAATCCAATCTCATCCAACTACTATCCTCAGATGTTG
GAGCAGGCCATGAATCACTTTGGTGTGGACATGGACAAGCCTTTTGAGGAATTGACGGAAGAGGAGAAGAACCTGATTTT
CAACGGTTCTGACGGGAAAGAATTCCATTTCCATTATGAAAATGAGTTCGGTGGAGTCCGAGATATTGACATTCCATTCG
AGGGCTTGATTACCAACATTAATCGCCGCTATCGTGAAACCAATAGTGATTACACACGGACAGTCATGAAGACTTACATG
AATGAACTGACCTGTGGGACCTGCCACGGCTATCGCCTCAATGACCAAGCCCTGTCTGTCAAAGTCGGAGGCGAGCAGGG
ACTTCATATCGGACAATTATCAGACTTGTCCGTGGCGGATCATTTGCAAGTCATTGAACATCTGACCTTGTCTGAAAATG
AAGCCACCATTGCAACACCCATTGTCAAGGAAATCAAGGATCGCCTGTCCTTCCTAAATAACGTTGGTCTCAACTATCTG
ACTCTTTCACGAGCAGCAGGTACCCTTTCTGGTGGTGAGAGCCAGCGGATTCGTCTGGCGACTCAGATTGGCTCTAACCT
GTCTGGTGTCCTCTATATTCTGGATGAGCCGTCGATTGGTCTGCACCAGCGGGACAATGACCGTCTGATTGCTAGTCTTA
AGAAAATGCGTGATTTGGGCAATACATTGATTGTGGTGGAGCATGATGAGGACACTATGCGTGAGGCGGACTGGTTGATT
GACATCGGTCCAGGTGCGGGTGTGTTTGGCGGAGAAATCGTGGCCTCTGGCACACCAGCCCAAGTAGCTAAAAACAAGAA
ATCCATTACAGGCCAGTACCTGTCTGGCAAACGTGAAATTCCAGTTCCTTTGGAACGTCGTGTTGGAAATGGTCGATTCT
TAGAGGTGACCGGTGCCAAGGAAAACAACCTGCAAGATGTGACTGTTCGTTTCCCACTCGGAAAATTTGTAGCGGTGACA
GGGGTGTCTGGCTCAGGTAAGTCAACTCTGGTCAATTCCATTCTGAAAAAAGCTATTGCTCAGAAACTCAATCGCAATTC
GGACAAGCCAGGTAAGTTCAAGTCTATTTCAGGAATTGAACACTTGGACCGCCTGATTGATATTGACCAAAGCCCGATTG
GACGGACACCACGTTCTAACCCAGCTACCTACACAGGTGTCTTTGACGATATTCGGGATTTGTTTGCCCAGACCAATGAA
GCCAAGATTCGTGGCTACAAGAAGGGCCGTTTCTCCTTTAACGTCAAAGGTGGACGGTGTGAGGCTTGTTCTGGTGATGG
GATTATCAAGATTGAAATGCACTTCCTGCCCGATGTCTTTGTACCTTGTGAAGTCTGTCATGGACACCGCTATAATTCTG
AAACCTTGGAAGTACACTACAAGGAGAAAAATATCGCTCAGGTCCTTGATATGACGGTCAATGACGCGGTCGAGTTCTTC
AAGCATATTCCAAAAATTGAGCGGAAACTTCGTACTATTCAAGATGTAGGTTTGGGCTACGTTACTCTAGGTCAGCCAGC
AACGACCCTATCAGGTGGGGAAGCCCAGCGTATGAAGTTGGCTTCTGAACTCCACAAGCGGTCAACTGGTAAATCCTTGT
ATATCTTGGATGAGCCGACGACAGGTCTGCATACGGAGGACATTGCCCAGTTGCTCAAGGTCTTGGCTCGCTTTGTTGAT
GATGGCAATACCGTGCTGGTCATCGAGCACAATCTGGATGTTATCAAGACAGCCGACCACATTATCGACATGGGACCGGA
AGGCGGTGTCGGTGGCGGTACCGTTGTCGCGACAGGAACACCAGAAGAAGTGGCGGAGAACCCAGCCAGCTTTACAGGCC
AGTATCTGAAAATGAAGTTGAAATAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (132-238)

• ABC transporter (ABC_tran) (624-860)

• UvrA DNA-binding domain (UvrA_DNA-bind) (288-396)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	89.149	99.894	0.891
uvrA	Streptococcus pneumoniae TIGR4	89.149	99.894	0.891
uvrA	Streptococcus pneumoniae D39	89.149	99.894	0.891