Detailed information NTG0682474

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: M1S41_RS18860
• Genome accession: NZ_CP096688
• Coordinates: 3884485..3885639 (+)
• Length: 384 a.a.
• NCBI ID: WP_000755281.1
• Uniprot ID: A0A059ZKS3
• Organism: Acinetobacter baumannii strain 5840
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3879485..3890639

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1S41_RS18835 (M1S41_18835)	-	3879637..3880851 (+)	1215	WP_001177965.1	oxygenase MpaB family protein	-
M1S41_RS18840 (M1S41_18840)	-	3880921..3881127 (-)	207	WP_000182542.1	hypothetical protein	-
M1S41_RS18845 (M1S41_18845)	-	3881181..3883295 (-)	2115	WP_001120663.1	TonB-dependent copper receptor	-
M1S41_RS18850 (M1S41_18850)	-	3883367..3883795 (-)	429	WP_000231985.1	DUF2946 family protein	-
M1S41_RS18855 (M1S41_18855)	def	3883832..3884362 (-)	531	WP_001196539.1	peptide deformylase	-
M1S41_RS18860 (M1S41_18860)	tsaP	3884485..3885639 (+)	1155	WP_000755281.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
M1S41_RS18865 (M1S41_18865)	dprA	3885660..3886790 (+)	1131	WP_002017176.1	DNA-processing protein DprA	Machinery gene
M1S41_RS18870 (M1S41_18870)	-	3886841..3887410 (+)	570	WP_000633612.1	Sua5/YciO/YrdC/YwlC family protein	-
M1S41_RS18875 (M1S41_18875)	-	3887802..3888722 (-)	921	WP_002000451.1	DMT family transporter	-
M1S41_RS18880 (M1S41_18880)	-	3888828..3889478 (-)	651	WP_001984979.1	TetR/AcrR family transcriptional regulator	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 42350.28 Da
• Isoelectric Point: 8.5816

>NTDB_id=682474 M1S41_RS18860 WP_000755281.1 3884485..3885639(+) (tsaP) [Acinetobacter baumannii strain 5840]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide

• Length: 1155 bp

>NTDB_id=682474 M1S41_RS18860 WP_000755281.1 3884485..3885639(+) (tsaP) [Acinetobacter baumannii strain 5840]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCTTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCCCTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTCGGTATTATTCGCCGCTATACAGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGTTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGTGATCGTGTTATGCCTGA
AGAGCAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGCTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACTAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains

Predicted by InterproScan.

• LysM domain (LysM) (57-102)

3D structure

• AlphaFold DB: A0A059ZKS3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	99.479	100	0.995