Detailed information NTG0682262

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: OHM52_RS04815
• Genome accession: NZ_CP109937
• Coordinates: 959068..960138 (+)
• Length: 356 a.a.
• NCBI ID: WP_002935006.1
• Uniprot ID: -
• Organism: Streptococcus suis strain TRG6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 954068..965138

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHM52_RS04790 (OHM52_04790)	-	954789..955121 (+)	333	WP_002935001.1	putative DNA-binding protein	-
OHM52_RS04795 (OHM52_04795)	ffh	955134..956708 (+)	1575	WP_002935002.1	signal recognition particle protein	-
OHM52_RS04800 (OHM52_04800)	-	956902..957570 (+)	669	WP_002935003.1	SatD family protein	-
OHM52_RS04805 (OHM52_04805)	-	957574..958314 (+)	741	WP_009909823.1	DUF3307 domain-containing protein	-
OHM52_RS04810 (OHM52_04810)	-	958380..958901 (+)	522	WP_002935005.1	AAA family ATPase	-
OHM52_RS04815 (OHM52_04815)	xerS	959068..960138 (+)	1071	WP_002935006.1	tyrosine recombinase XerS	Machinery gene
OHM52_RS04820 (OHM52_04820)	-	960208..961716 (-)	1509	WP_013730362.1	phosphoglucomutase	-
OHM52_RS04825 (OHM52_04825)	-	961792..962733 (-)	942	WP_002935009.1	sensor histidine kinase	-
OHM52_RS04830 (OHM52_04830)	braR	962730..963395 (-)	666	WP_009909826.1	response regulator transcription factor	Regulator
OHM52_RS04835 (OHM52_04835)	-	963434..963640 (-)	207	WP_370287028.1	type II toxin-antitoxin system RelE/ParE family toxin	-
OHM52_RS04840 (OHM52_04840)	relB	963681..963920 (-)	240	WP_002935014.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41545.71 Da
• Isoelectric Point: 9.2257

>NTDB_id=682262 OHM52_RS04815 WP_002935006.1 959068..960138(+) (xerS) [Streptococcus suis strain TRG6]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVSVERIADIPLDILEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=682262 OHM52_RS04815 WP_002935006.1 959068..960138(+) (xerS) [Streptococcus suis strain TRG6]
ATGAGACGCGAGTTATTACTAGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGATTCTTTGAGTGGTTACAGG
ATTCGGATTTGGTATCTGTGGAACGGATTGCTGACATTCCTTTGGATATTCTGGAACATTTGACAAAAAAAGATATGGAA
GCCTTTATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTGTCGGCTCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACCAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCTGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACCATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCTTTCCAGAAAAATAAGGAGCGAGATTTGGCGATTCTGGCACTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAATCTCAATATGATGATTATCGAAGTAACCCGTAAGGGTGGTAAGCGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTATCTGGAAGCCTATATGAGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACGGCCTTCTTCCTGTCCGAATACCGTGGTCTACCCAATCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCATACCTTGGCAACTCGCCTATACGACGCCACA
AAGTCGCAAGTTCTGGTCAGTCATCAGCTGGGCCACGCCAATACTCAGGTCACTGACCTCTACACCCATATAGTCAATGA
TGAGCAAAAAAATGCACTGGATCAATTATAG

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (190-344)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	82.865	100	0.829