Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   JMUB1235_RS02325 Genome accession   NZ_AP017629
Coordinates   432845..433654 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain JMUB1235     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 427845..438654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JMUB1235_RS02305 (JMUB1235_0456) - 428287..429534 (+) 1248 WP_023612155.1 AMP-binding protein -
  JMUB1235_RS02310 (JMUB1235_0457) - 429590..430624 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  JMUB1235_RS02315 (JMUB1235_0458) vicR 430786..431496 (+) 711 WP_002985645.1 response regulator YycF Regulator
  JMUB1235_RS02320 (JMUB1235_0459) vicK 431489..432841 (+) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  JMUB1235_RS02325 (JMUB1235_0460) vicX 432845..433654 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  JMUB1235_RS02330 (JMUB1235_0461) rnc 434086..434778 (+) 693 WP_002985639.1 ribonuclease III -
  JMUB1235_RS02335 (JMUB1235_0462) smc 434779..438318 (+) 3540 WP_031488430.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=68219 JMUB1235_RS02325 WP_002985641.1 432845..433654(+) (vicX) [Streptococcus pyogenes strain JMUB1235]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=68219 JMUB1235_RS02325 WP_002985641.1 432845..433654(+) (vicX) [Streptococcus pyogenes strain JMUB1235]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment