Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   M0696_RS15955 Genome accession   NZ_CP096590
Coordinates   3130369..3131013 (-) Length   214 a.a.
NCBI ID   WP_166848873.1    Uniprot ID   -
Organism   Bacillus rugosus strain A78.1     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3125369..3136013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0696_RS15920 (M0696_15920) - 3126560..3126991 (+) 432 WP_166848893.1 Na(+)/H(+) antiporter subunit B -
  M0696_RS15925 (M0696_15925) - 3126991..3127332 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  M0696_RS15930 (M0696_15930) - 3127325..3128806 (+) 1482 WP_248602147.1 Na+/H+ antiporter subunit D -
  M0696_RS15935 (M0696_15935) - 3128812..3129288 (+) 477 WP_166848885.1 Na+/H+ antiporter subunit E -
  M0696_RS15940 (M0696_15940) - 3129288..3129572 (+) 285 WP_166848882.1 Na(+)/H(+) antiporter subunit F1 -
  M0696_RS15945 (M0696_15945) mnhG 3129556..3129930 (+) 375 WP_166848879.1 monovalent cation/H(+) antiporter subunit G -
  M0696_RS15950 (M0696_15950) - 3129969..3130349 (-) 381 WP_248602148.1 hotdog fold thioesterase -
  M0696_RS15955 (M0696_15955) comA 3130369..3131013 (-) 645 WP_166848873.1 two-component system response regulator ComA Regulator
  M0696_RS15960 (M0696_15960) - 3131094..3133393 (-) 2300 Protein_3084 histidine kinase -
  M0696_RS15965 (M0696_15965) comX 3133405..3133569 (-) 165 WP_015384519.1 competence pheromone ComX -
  M0696_RS15970 (M0696_15970) - 3133582..3134442 (-) 861 WP_248602149.1 polyprenyl synthetase family protein -
  M0696_RS15975 (M0696_15975) degQ 3134627..3134767 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  M0696_RS15980 (M0696_15980) - 3134989..3135051 (+) 63 Protein_3088 hypothetical protein -
  M0696_RS15985 (M0696_15985) - 3135228..3135596 (+) 369 WP_166848863.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24133.52 Da        Isoelectric Point: 4.6053

>NTDB_id=681979 M0696_RS15955 WP_166848873.1 3130369..3131013(-) (comA) [Bacillus rugosus strain A78.1]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPTEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPQCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=681979 M0696_RS15955 WP_166848873.1 3130369..3131013(-) (comA) [Bacillus rugosus strain A78.1]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATCT
GTCTGTTGATTGTCTCAGTCCTGAACCGACCGAACAGTTTATTAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATTTAGGCGGCGAGGTTAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCAGTGTAAAATT
ATCGTTTATACCGGTTATGAGGTCGAGGATTATTTTGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTAATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTCCAAGAAGTTGAAAAGGGTTTTACAAACCAAGAAATCGCAGATGCACTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCCTAACATCTATTTTCAATAAGCTGAATGTCGGTTCCCGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

99.065

100

0.991