Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   M0696_RS12010 Genome accession   NZ_CP096590
Coordinates   2401572..2402375 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus rugosus strain A78.1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2396572..2407375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0696_RS11990 (M0696_11990) - 2397640..2398371 (-) 732 WP_248601993.1 glycerophosphodiester phosphodiesterase -
  M0696_RS11995 (M0696_11995) - 2398450..2399070 (-) 621 WP_166851030.1 N-acetylmuramoyl-L-alanine amidase -
  M0696_RS12000 (M0696_12000) - 2399090..2399386 (-) 297 WP_166851027.1 hypothetical protein -
  M0696_RS21070 - 2399699..2399782 (+) 84 Protein_2319 hypothetical protein -
  M0696_RS12005 (M0696_12005) - 2399918..2401036 (+) 1119 WP_248601994.1 NADH-dependent flavin oxidoreductase -
  M0696_RS12010 (M0696_12010) spo0A 2401572..2402375 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  M0696_RS12015 (M0696_12015) spoIVB 2402652..2403932 (-) 1281 WP_166850987.1 SpoIVB peptidase -
  M0696_RS12020 (M0696_12020) recN 2404107..2405837 (-) 1731 WP_222143135.1 DNA repair protein RecN Machinery gene
  M0696_RS12025 (M0696_12025) argR 2405873..2406322 (-) 450 WP_124072962.1 arginine repressor ArgR -
  M0696_RS12030 (M0696_12030) - 2406419..2407264 (-) 846 WP_248601995.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=681955 M0696_RS12010 WP_003226427.1 2401572..2402375(-) (spo0A) [Bacillus rugosus strain A78.1]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=681955 M0696_RS12010 WP_003226427.1 2401572..2402375(-) (spo0A) [Bacillus rugosus strain A78.1]
GTGGAGAAAATTAAAGTTTGTGTTGCTGACGATAATCGAGAGCTGGTAAGCCTGTTGAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGTGTTGCTTATAACGGACAGGAATGCCTGTCGTTGTTTAAAGAAAAAGATCCCGATGTCCTCG
TTTTGGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGCGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGACAAGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGCGTGACGCATCGTGCGC
CTTCATCGCAAAGCAGCATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCGGCCCATATTAAAGGTTATCTTTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
TGAATTACTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTCAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCGATCGAAGTGGCATGGAGCAGAGGTAACATTGATTCCATTTCCTCGTTGTTCGGCTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCAGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAGCATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1