Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   M0696_RS06355 Genome accession   NZ_CP096590
Coordinates   1257663..1258814 (+) Length   383 a.a.
NCBI ID   WP_222142601.1    Uniprot ID   -
Organism   Bacillus rugosus strain A78.1     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1252663..1263814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0696_RS06320 (M0696_06320) - 1253323..1254537 (+) 1215 WP_222142934.1 MFS transporter -
  M0696_RS06325 (M0696_06325) - 1254717..1255295 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  M0696_RS06330 (M0696_06330) spx 1255476..1255871 (+) 396 WP_003239281.1 transcriptional regulator Spx -
  M0696_RS06335 (M0696_06335) - 1255914..1256570 (-) 657 WP_166853627.1 TerC family protein -
  M0696_RS06340 (M0696_06340) - 1256756..1256881 (+) 126 WP_120698858.1 hypothetical protein -
  M0696_RS06345 (M0696_06345) mecA 1256848..1257504 (+) 657 WP_014113374.1 adaptor protein MecA Regulator
  M0696_RS06350 (M0696_06350) - 1257499..1257619 (-) 121 Protein_1188 hypothetical protein -
  M0696_RS06355 (M0696_06355) coiA 1257663..1258814 (+) 1152 WP_222142601.1 competence protein CoiA family protein Machinery gene
  M0696_RS06360 (M0696_06360) pepF 1259044..1260873 (+) 1830 WP_166854689.1 oligoendopeptidase F -
  M0696_RS06365 (M0696_06365) - 1260910..1261077 (-) 168 WP_019713977.1 hypothetical protein -
  M0696_RS06370 (M0696_06370) spxH 1261391..1262290 (-) 900 WP_166853625.1 protease adaptor protein SpxH -
  M0696_RS06375 (M0696_06375) - 1262287..1262685 (-) 399 WP_003224612.1 group 2 truncated hemoglobin YjbI -
  M0696_RS06380 (M0696_06380) - 1262940..1263677 (-) 738 WP_248602606.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44805.01 Da        Isoelectric Point: 9.9961

>NTDB_id=681943 M0696_RS06355 WP_222142601.1 1257663..1258814(+) (coiA) [Bacillus rugosus strain A78.1]
MFSAVTEDGQMFHLLGARQSQKLKRRRFFCPVCGGELDVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQQASPILEPYIKNINQRPDIMAKIKGRMLAVEYQCATLSSDVFQKRTEGFKQAGIIPQWIVGYSRIQRAAPSFYQLSAF
HWQFINASPSRELICYCPETRSFCRLSHIIPFYTNHSYSSVQTIPIHRAAAYDLFFTEPTPSFRYSSWTKAIHRFRHKPH
RFISKETNRLRLLFYEKRQTPLSFLPTEVFVPVIKGAVFKSPVFVWQGFLYLFITDLGYKRAPIRFSAVLQQCKLHIHKK
NISLRYECSKDCLSDVVKQYIDFLCKKGFLRETQKEVYVLNQPAEGLRSLQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=681943 M0696_RS06355 WP_222142601.1 1257663..1258814(+) (coiA) [Bacillus rugosus strain A78.1]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCGGCAAAGCCAGAAATTAAAGCGGAGACG
ATTCTTCTGCCCGGTATGCGGAGGAGAGCTTGATGTGAAGCTCGGACTCCAAAAGGCGCCGCATTTCGCCCATAAACAGA
ACAAGTCTTGCTCGATAGACATAGAACCGGAAAGCGCCTACCACTTAGAGGGAAAAAGACAGCTGTACGTATGGCTGAAA
ACGCAACAGGCTTCGCCGATATTAGAACCGTATATCAAGAACATCAATCAAAGACCGGATATCATGGCAAAGATCAAGGG
ACGCATGCTTGCTGTTGAGTATCAATGTGCCACTCTTTCTTCAGATGTTTTTCAAAAGCGGACGGAAGGCTTCAAACAAG
CAGGAATCATCCCGCAGTGGATTGTGGGATACAGCCGCATACAACGCGCGGCCCCATCCTTTTATCAGCTTTCTGCATTT
CATTGGCAGTTTATCAATGCAAGTCCATCCAGGGAACTAATATGTTATTGCCCGGAAACACGTTCTTTCTGCCGGCTCAG
CCACATCATTCCATTTTACACAAACCATTCGTATTCCTCCGTTCAAACGATCCCTATCCATCGGGCTGCTGCGTACGATC
TTTTTTTCACTGAACCGACACCTTCATTTCGATATTCAAGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTATCTCCAAGGAAACAAACCGCCTCAGGCTGCTGTTTTATGAAAAGCGGCAGACACCCCTTTCTTTTCTTCCGAC
GGAAGTGTTTGTTCCTGTTATAAAAGGAGCTGTTTTTAAAAGCCCGGTTTTTGTGTGGCAGGGGTTTCTATATCTGTTTA
TTACGGATCTAGGATATAAACGCGCGCCAATTCGCTTTTCAGCCGTTTTACAGCAATGCAAACTGCACATTCATAAAAAG
AACATCTCGCTCAGGTACGAATGCAGCAAAGATTGTCTTTCTGATGTTGTGAAACAGTACATTGATTTTTTGTGTAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAACCAGCCTGCAGAAGGCTTACGCTCTTTACAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

87.668

97.389

0.854