Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   M0696_RS06235 Genome accession   NZ_CP096590
Coordinates   1235373..1235564 (+) Length   63 a.a.
NCBI ID   WP_222142592.1    Uniprot ID   -
Organism   Bacillus rugosus strain A78.1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1230373..1240564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0696_RS06205 (M0696_06205) argF 1231236..1232180 (+) 945 WP_166853643.1 ornithine carbamoyltransferase -
  M0696_RS06210 (M0696_06210) - 1232281..1232460 (+) 180 WP_003224549.1 YjzC family protein -
  M0696_RS06215 (M0696_06215) - 1232505..1232690 (-) 186 WP_003224551.1 YjzD family protein -
  M0696_RS06220 (M0696_06220) - 1232941..1233675 (+) 735 WP_248602604.1 hypothetical protein -
  M0696_RS06225 (M0696_06225) - 1233757..1234314 (+) 558 WP_166853641.1 hypothetical protein -
  M0696_RS06230 (M0696_06230) med 1234405..1235358 (+) 954 WP_222142591.1 transcriptional regulator Med Regulator
  M0696_RS06235 (M0696_06235) comZ 1235373..1235564 (+) 192 WP_222142592.1 ComZ family protein Regulator
  M0696_RS06240 (M0696_06240) - 1235594..1235821 (-) 228 WP_222142933.1 hypothetical protein -
  M0696_RS06245 (M0696_06245) fabH 1235987..1236925 (+) 939 WP_222142593.1 beta-ketoacyl-ACP synthase III -
  M0696_RS06250 (M0696_06250) fabF 1236950..1238191 (+) 1242 WP_222142594.1 beta-ketoacyl-ACP synthase II -
  M0696_RS06255 (M0696_06255) - 1238267..1239052 (+) 786 WP_166853637.1 DUF2268 domain-containing protein -
  M0696_RS06260 (M0696_06260) appD 1239242..1240228 (+) 987 WP_248602605.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7215.26 Da        Isoelectric Point: 4.1652

>NTDB_id=681939 M0696_RS06235 WP_222142592.1 1235373..1235564(+) (comZ) [Bacillus rugosus strain A78.1]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMDLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=681939 M0696_RS06235 WP_222142592.1 1235373..1235564(+) (comZ) [Bacillus rugosus strain A78.1]
ATGCAGCACGAAAAATCACTTGAGTTCTTGCAAATTGCCATGAAATATCTGCCTGAAGCGAAAGAACAGCTTGAAAAATC
AGGCATTGAGCTGTCAATGGAGGCCATACAGCCGTTTATGGATCTATTTACAACGGTAATGGCTGAAGCTTATGAGCTTG
GCAAGTCTGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

98.413

100

0.984