Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   M0696_RS02200 Genome accession   NZ_CP096590
Coordinates   434607..435557 (+) Length   316 a.a.
NCBI ID   WP_248602437.1    Uniprot ID   -
Organism   Bacillus rugosus strain A78.1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 429607..440557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0696_RS02175 (M0696_02175) - 429673..431088 (+) 1416 WP_248602435.1 HAMP domain-containing sensor histidine kinase -
  M0696_RS02180 (M0696_02180) rapC 431251..432399 (+) 1149 WP_222143543.1 response regulator aspartate phosphatase RapC Regulator
  M0696_RS02185 (M0696_02185) phrC 432383..432505 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  M0696_RS02190 (M0696_02190) - 432599..432706 (-) 108 WP_071578333.1 YjcZ family sporulation protein -
  M0696_RS02195 (M0696_02195) - 432857..434221 (-) 1365 WP_248602436.1 aspartate kinase -
  M0696_RS02200 (M0696_02200) ceuB 434607..435557 (+) 951 WP_248602437.1 petrobactin ABC transporter permease YclN Machinery gene
  M0696_RS02205 (M0696_02205) yclO 435550..436497 (+) 948 WP_248602438.1 petrobactin ABC transporter permease YclO -
  M0696_RS02210 (M0696_02210) yclP 436491..437249 (+) 759 WP_248602439.1 petrobactin ABC transporter ATP-binding protein YclP -
  M0696_RS02215 (M0696_02215) - 437271..438227 (+) 957 WP_222143547.1 siderophore ABC transporter substrate-binding protein -
  M0696_RS02220 (M0696_02220) - 438276..439694 (-) 1419 WP_222143548.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34900.33 Da        Isoelectric Point: 9.9809

>NTDB_id=681928 M0696_RS02200 WP_248602437.1 434607..435557(+) (ceuB) [Bacillus rugosus strain A78.1]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVFADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=681928 M0696_RS02200 WP_248602437.1 434607..435557(+) (ceuB) [Bacillus rugosus strain A78.1]
ATGAAGTTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTGTTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTTGATTTAAGCAAACAAGAGGCATCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGTATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACTACGGCT
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATATCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATGAAAATGCT
GGTTGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCGTATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTTCAGGGAGACTTCTCTTTAGTTGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTTTGCGGATAAATTCACATTGGCCGGTATGGGAGAAAGCTTTTCAGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATTGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAAAACAGTCTGCCGCACAC
GGCGCTATTGGGAGCGGTTTTTGTGCTCTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTACGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525