Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | M0696_RS00575 | Genome accession | NZ_CP096590 |
| Coordinates | 103184..105616 (+) | Length | 810 a.a. |
| NCBI ID | WP_003225731.1 | Uniprot ID | G4NQC0 |
| Organism | Bacillus rugosus strain A78.1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 98184..110616
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M0696_RS00560 (M0696_00560) | ctsR | 101061..101525 (+) | 465 | WP_166854508.1 | transcriptional regulator CtsR | - |
| M0696_RS00565 (M0696_00565) | mcsA | 101539..102096 (+) | 558 | WP_014475591.1 | protein-arginine kinase activator protein McsA | - |
| M0696_RS00570 (M0696_00570) | - | 102096..103187 (+) | 1092 | WP_166854506.1 | protein arginine kinase | - |
| M0696_RS00575 (M0696_00575) | clpC | 103184..105616 (+) | 2433 | WP_003225731.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| M0696_RS00580 (M0696_00580) | radA | 105707..107083 (+) | 1377 | WP_166854505.1 | DNA repair protein RadA | Machinery gene |
| M0696_RS00585 (M0696_00585) | disA | 107087..108169 (+) | 1083 | WP_003242042.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| M0696_RS00590 (M0696_00590) | - | 108284..109384 (+) | 1101 | WP_166854504.1 | PIN/TRAM domain-containing protein | - |
| M0696_RS00595 (M0696_00595) | ispD | 109399..110097 (+) | 699 | WP_166854503.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| M0696_RS00600 (M0696_00600) | ispF | 110090..110566 (+) | 477 | WP_003225745.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90063.57 Da Isoelectric Point: 6.1203
>NTDB_id=681920 M0696_RS00575 WP_003225731.1 103184..105616(+) (clpC) [Bacillus rugosus strain A78.1]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSATGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSATGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=681920 M0696_RS00575 WP_003225731.1 103184..105616(+) (clpC) [Bacillus rugosus strain A78.1]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTTCGATTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGGATTGCTGCTAAAGCTCTACAAGCGCTTG
GACTTGGTTCAGATAAAATTCAAAAAGAAGTTGAGAGTTTGATCGGTCGCGGGCAGGAAATGTCTCAAACGATTCATTAC
ACTCCTAGAGCTAAGAAAGTCATTGAACTTTCAATGGATGAGGCAAGAAAACTCGGTCATTCTTATGTCGGAACAGAACA
TATTCTTCTTGGTCTGATTCGCGAAGGTGAAGGTGTTGCTGCGAGGGTTCTGAATAACCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAGGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGACAGGAACAAACAGTAATGCGAATACG
CCTACGCTTGACAGCTTGGCAAGAGACTTAACCGCTATTGCGAAGGAAGACAGCCTTGATCCTGTAATTGGCAGAAGCAA
GGAAATCCAGCGTGTGATCGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATCGGTGAACCTGGTGTAGGTA
AAACGGCTATCGCAGAAGGTTTGGCACAGCAAATTATCAATAACGAAGTTCCCGAAATCTTGCGCGATAAACGCGTGATG
ACATTAGACATGGGAACAGTAGTTGCCGGCACAAAATATCGCGGAGAATTTGAGGATCGCCTGAAGAAGGTCATGGACGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAACTCCATACATTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGATGCATCTAACATTTTAAAACCTTCACTTGCTCGCGGCGAACTTCAATGTATTGGGGCGACGACTCTTGATGAGTAC
CGCAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATTCAGGTTGATCAGCCGTCTGCAGATGAAAG
CATTCAAATTTTAAAAGGCTTGCGTGACCGATATGAAGCTCACCACCGTGTATCAATTACAGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTAATCGATGAAGCGGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAATTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAACAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGACAGGAAAACTCAGAGGTGACTGTTGATGATATTGCGATGGTTGTA
TCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCGCAAACTGAAACAGATAAGCTTCTCAATATGGAAAGCATTCTTCA
CTCCCGTGTGATCGGCCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCAGTCAGACGTGCAAGAGCAGGGTTAAAAGACC
CTAAACGTCCAATTGGCTCATTCATTTTCTTAGGCCCTACAGGTGTTGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCTATTTTCGGTGACGAGGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATATGTGGGATACGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTCTTCAATATCCTTCTGCAAGTTCTTGAAGACGGAAGATTGACT
GATTCTAAAGGGCGTACAGTCGATTTCCGCAATACCATTCTGATTATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAAGATAAAGTAATGGGTGAATTGA
AGCGCGCGTTCAGACCGGAGTTTATCAACCGGATTGATGAAATCATTGTCTTCCATTCACTTGAGAAAAAACATCTTACT
GAAATCGTGTCATTGATGTCTGATCAATTAACGAAACGCCTAAAAGAACAGGATCTTTCTATCGAATTGACCGATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGTGTTGACCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAAACATGTCG
AGGACCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTTGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTTCGATTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGGATTGCTGCTAAAGCTCTACAAGCGCTTG
GACTTGGTTCAGATAAAATTCAAAAAGAAGTTGAGAGTTTGATCGGTCGCGGGCAGGAAATGTCTCAAACGATTCATTAC
ACTCCTAGAGCTAAGAAAGTCATTGAACTTTCAATGGATGAGGCAAGAAAACTCGGTCATTCTTATGTCGGAACAGAACA
TATTCTTCTTGGTCTGATTCGCGAAGGTGAAGGTGTTGCTGCGAGGGTTCTGAATAACCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAGGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGACAGGAACAAACAGTAATGCGAATACG
CCTACGCTTGACAGCTTGGCAAGAGACTTAACCGCTATTGCGAAGGAAGACAGCCTTGATCCTGTAATTGGCAGAAGCAA
GGAAATCCAGCGTGTGATCGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATCGGTGAACCTGGTGTAGGTA
AAACGGCTATCGCAGAAGGTTTGGCACAGCAAATTATCAATAACGAAGTTCCCGAAATCTTGCGCGATAAACGCGTGATG
ACATTAGACATGGGAACAGTAGTTGCCGGCACAAAATATCGCGGAGAATTTGAGGATCGCCTGAAGAAGGTCATGGACGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAACTCCATACATTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGATGCATCTAACATTTTAAAACCTTCACTTGCTCGCGGCGAACTTCAATGTATTGGGGCGACGACTCTTGATGAGTAC
CGCAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATTCAGGTTGATCAGCCGTCTGCAGATGAAAG
CATTCAAATTTTAAAAGGCTTGCGTGACCGATATGAAGCTCACCACCGTGTATCAATTACAGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTAATCGATGAAGCGGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAATTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAACAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGACAGGAAAACTCAGAGGTGACTGTTGATGATATTGCGATGGTTGTA
TCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCGCAAACTGAAACAGATAAGCTTCTCAATATGGAAAGCATTCTTCA
CTCCCGTGTGATCGGCCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCAGTCAGACGTGCAAGAGCAGGGTTAAAAGACC
CTAAACGTCCAATTGGCTCATTCATTTTCTTAGGCCCTACAGGTGTTGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCTATTTTCGGTGACGAGGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATATGTGGGATACGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTCTTCAATATCCTTCTGCAAGTTCTTGAAGACGGAAGATTGACT
GATTCTAAAGGGCGTACAGTCGATTTCCGCAATACCATTCTGATTATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAAGATAAAGTAATGGGTGAATTGA
AGCGCGCGTTCAGACCGGAGTTTATCAACCGGATTGATGAAATCATTGTCTTCCATTCACTTGAGAAAAAACATCTTACT
GAAATCGTGTCATTGATGTCTGATCAATTAACGAAACGCCTAAAAGAACAGGATCTTTCTATCGAATTGACCGATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGTGTTGACCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAAACATGTCG
AGGACCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTTGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
99.259 |
100 |
0.993 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.374 |
99.012 |
0.499 |
| clpC | Streptococcus thermophilus LMD-9 |
46.602 |
100 |
0.474 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.359 |
100 |
0.472 |
| clpC | Streptococcus pneumoniae Rx1 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.117 |
99.877 |
0.451 |
| clpC | Streptococcus mutans UA159 |
43.462 |
100 |
0.443 |
| clpE | Streptococcus mutans UA159 |
53.159 |
80.123 |
0.426 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.523 |
87.778 |
0.426 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae Rx1 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae D39 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae R6 |
53.612 |
76.914 |
0.412 |