Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | M1F46_RS07950 | Genome accession | NZ_CP096539 |
| Coordinates | 1643905..1644204 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain RIVM_M047065 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1638905..1649204
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1F46_RS07925 (M1F46_07915) | gcvPA | 1640117..1641463 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| M1F46_RS07930 (M1F46_07920) | gcvT | 1641483..1642574 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| M1F46_RS07935 (M1F46_07925) | - | 1642733..1643257 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| M1F46_RS07940 (M1F46_07930) | - | 1643247..1643393 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| M1F46_RS07945 (M1F46_07935) | comGF | 1643490..1643987 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| M1F46_RS07950 (M1F46_07940) | comGE | 1643905..1644204 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| M1F46_RS07955 (M1F46_07945) | comGD | 1644191..1644637 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| M1F46_RS07960 (M1F46_07950) | comGC | 1644615..1644926 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M1F46_RS07965 (M1F46_07955) | comGB | 1644940..1646010 (-) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| M1F46_RS07970 (M1F46_07960) | comGA | 1645982..1646956 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M1F46_RS07975 (M1F46_07965) | - | 1647008..1647631 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| M1F46_RS07980 (M1F46_07970) | - | 1647628..1647957 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| M1F46_RS07985 (M1F46_07975) | - | 1647957..1648943 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| M1F46_RS07990 (M1F46_07980) | - | 1648940..1649143 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=681692 M1F46_RS07950 WP_000844413.1 1643905..1644204(-) (comGE) [Staphylococcus aureus strain RIVM_M047065]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=681692 M1F46_RS07950 WP_000844413.1 1643905..1644204(-) (comGE) [Staphylococcus aureus strain RIVM_M047065]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |