Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   M1F47_RS04775 Genome accession   NZ_CP096535
Coordinates   995091..996077 (+) Length   328 a.a.
NCBI ID   WP_031912699.1    Uniprot ID   -
Organism   Staphylococcus aureus strain RIVM_M047916     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 990091..1001077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M1F47_RS04755 (M1F47_04750) - 990459..992081 (+) 1623 WP_000406183.1 peptide ABC transporter substrate-binding protein -
  M1F47_RS04760 (M1F47_04755) trpS 992201..993190 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  M1F47_RS04765 (M1F47_04760) spxA 993485..993880 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  M1F47_RS04770 (M1F47_04765) mecA 994251..994970 (+) 720 WP_001217731.1 adaptor protein MecA -
  M1F47_RS04775 (M1F47_04770) coiA 995091..996077 (+) 987 WP_031912699.1 competence protein CoiA family protein Machinery gene
  M1F47_RS04780 (M1F47_04775) pepF 996125..997933 (+) 1809 WP_000082727.1 oligoendopeptidase F -
  M1F47_RS04785 (M1F47_04780) yjbH 998393..999199 (-) 807 WP_000896695.1 protease adaptor protein YjbH -
  M1F47_RS04790 (M1F47_04785) - 999222..999587 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  M1F47_RS04795 (M1F47_04790) - 999691..1000284 (-) 594 WP_000224612.1 CYTH domain-containing protein -
  M1F47_RS04800 (M1F47_04795) - 1000470..1000817 (+) 348 WP_001242104.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38830.40 Da        Isoelectric Point: 9.4277

>NTDB_id=681641 M1F47_RS04775 WP_031912699.1 995091..996077(+) (coiA) [Staphylococcus aureus strain RIVM_M047916]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPISYKQILQRMEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNVKMSELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGESILVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=681641 M1F47_RS04775 WP_031912699.1 995091..996077(+) (coiA) [Staphylococcus aureus strain RIVM_M047916]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTTCTTATAAACAGATTCTTCAACGAATGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGTCAAAATGAGTGAGTTGTTTAATGAGGCACCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAGAAAGCATATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCGATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

95.732

100

0.957
  coiA Staphylococcus aureus MW2

95.732

100

0.957