Detailed information
Overview
| Name | sigH | Type | Regulator |
| Locus tag | M1F47_RS02760 | Genome accession | NZ_CP096535 |
| Coordinates | 582834..583403 (+) | Length | 189 a.a. |
| NCBI ID | WP_000872866.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain RIVM_M047916 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 577834..588403
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1F47_RS02735 (M1F47_02730) | cysE | 579046..579693 (+) | 648 | WP_001805237.1 | serine O-acetyltransferase | - |
| M1F47_RS02740 (M1F47_02735) | cysS | 579677..581077 (+) | 1401 | WP_000631961.1 | cysteine--tRNA ligase | - |
| M1F47_RS02745 (M1F47_02740) | - | 581070..581474 (+) | 405 | WP_000370181.1 | Mini-ribonuclease 3 | - |
| M1F47_RS02750 (M1F47_02745) | rlmB | 581482..582228 (+) | 747 | WP_000390332.1 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | - |
| M1F47_RS02755 (M1F47_02750) | - | 582228..582752 (+) | 525 | WP_000664738.1 | NYN domain-containing protein | - |
| M1F47_RS02760 (M1F47_02755) | sigH | 582834..583403 (+) | 570 | WP_000872866.1 | RNA polymerase sigma factor | Regulator |
| M1F47_RS02765 (M1F47_02760) | rpmG | 583518..583661 (+) | 144 | WP_001788193.1 | 50S ribosomal protein L33 | - |
| M1F47_RS02770 (M1F47_02765) | secE | 583717..583899 (+) | 183 | WP_001074473.1 | preprotein translocase subunit SecE | - |
| M1F47_RS02775 (M1F47_02770) | nusG | 583912..584460 (+) | 549 | WP_001288302.1 | transcription termination/antitermination protein NusG | - |
| M1F47_RS02780 (M1F47_02775) | rplK | 584641..585063 (+) | 423 | WP_001085792.1 | 50S ribosomal protein L11 | - |
| M1F47_RS02785 (M1F47_02780) | rplA | 585271..585963 (+) | 693 | WP_001074619.1 | 50S ribosomal protein L1 | - |
| M1F47_RS02790 (M1F47_02785) | rplJ | 586235..586735 (+) | 501 | WP_001273085.1 | 50S ribosomal protein L10 | - |
| M1F47_RS02795 (M1F47_02790) | rplL | 586778..587146 (+) | 369 | WP_001273586.1 | 50S ribosomal protein L7/L12 | - |
| M1F47_RS02800 (M1F47_02795) | - | 587321..587929 (+) | 609 | WP_000020293.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 189 a.a. Molecular weight: 23043.97 Da Isoelectric Point: 9.6030
>NTDB_id=681634 M1F47_RS02760 WP_000872866.1 582834..583403(+) (sigH) [Staphylococcus aureus strain RIVM_M047916]
MKYDLTTQDSTIKRNNAINDKDFEKLVMDLQPLIIRCIKTFGFNHYDLEDLYQEILIRMYRSVQTFDFSGKQPFTNYVQC
LITSVKYDYLRKYLATNKRMDNLINEYRVTYPCAIKRYDVENNYLNKLAIKELIRQFKYLSAFEKDVMYLMCEQYKPREI
AQLMHVKEKVIYNAIQRCKNKIKRYFKMI
MKYDLTTQDSTIKRNNAINDKDFEKLVMDLQPLIIRCIKTFGFNHYDLEDLYQEILIRMYRSVQTFDFSGKQPFTNYVQC
LITSVKYDYLRKYLATNKRMDNLINEYRVTYPCAIKRYDVENNYLNKLAIKELIRQFKYLSAFEKDVMYLMCEQYKPREI
AQLMHVKEKVIYNAIQRCKNKIKRYFKMI
Nucleotide
Download Length: 570 bp
>NTDB_id=681634 M1F47_RS02760 WP_000872866.1 582834..583403(+) (sigH) [Staphylococcus aureus strain RIVM_M047916]
TTGAAATATGATTTGACAACTCAAGACAGTACAATCAAACGTAACAATGCAATAAATGATAAAGACTTCGAAAAGTTAGT
AATGGATCTACAACCATTAATTATTCGATGCATCAAAACATTTGGATTTAATCATTATGATTTAGAAGACTTATATCAAG
AAATACTTATACGGATGTATAGGTCGGTCCAAACATTTGATTTTAGTGGAAAGCAGCCTTTCACAAATTATGTTCAGTGT
TTAATTACGTCTGTAAAGTATGATTATTTGAGAAAATATTTAGCTACAAATAAAAGAATGGATAATTTGATTAATGAATA
TAGAGTTACGTATCCATGTGCAATAAAGCGTTATGATGTTGAAAACAATTATTTGAATAAATTAGCAATTAAAGAGTTGA
TTCGTCAGTTTAAGTATTTGAGTGCATTTGAAAAAGATGTCATGTATTTAATGTGTGAACAATATAAGCCGAGAGAAATT
GCTCAACTGATGCATGTAAAAGAGAAAGTGATTTATAATGCCATACAACGATGTAAAAATAAAATAAAACGTTATTTCAA
AATGATTTGA
TTGAAATATGATTTGACAACTCAAGACAGTACAATCAAACGTAACAATGCAATAAATGATAAAGACTTCGAAAAGTTAGT
AATGGATCTACAACCATTAATTATTCGATGCATCAAAACATTTGGATTTAATCATTATGATTTAGAAGACTTATATCAAG
AAATACTTATACGGATGTATAGGTCGGTCCAAACATTTGATTTTAGTGGAAAGCAGCCTTTCACAAATTATGTTCAGTGT
TTAATTACGTCTGTAAAGTATGATTATTTGAGAAAATATTTAGCTACAAATAAAAGAATGGATAATTTGATTAATGAATA
TAGAGTTACGTATCCATGTGCAATAAAGCGTTATGATGTTGAAAACAATTATTTGAATAAATTAGCAATTAAAGAGTTGA
TTCGTCAGTTTAAGTATTTGAGTGCATTTGAAAAAGATGTCATGTATTTAATGTGTGAACAATATAAGCCGAGAGAAATT
GCTCAACTGATGCATGTAAAAGAGAAAGTGATTTATAATGCCATACAACGATGTAAAAATAAAATAAAACGTTATTTCAA
AATGATTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sigH | Staphylococcus aureus MW2 |
98.413 |
100 |
0.984 |
| sigH | Staphylococcus aureus N315 |
97.354 |
100 |
0.974 |