Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG627_RS20080 Genome accession   NZ_CP109599
Coordinates   4589878..4591002 (-) Length   374 a.a.
NCBI ID   WP_329067031.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01429     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4584878..4596002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG627_RS20055 (OG627_20060) - 4585360..4585968 (-) 609 WP_329072823.1 hypothetical protein -
  OG627_RS20060 (OG627_20065) - 4586019..4586648 (-) 630 WP_329067024.1 SigE family RNA polymerase sigma factor -
  OG627_RS20065 (OG627_20070) - 4586809..4587828 (-) 1020 WP_329067025.1 A/G-specific adenine glycosylase -
  OG627_RS20070 (OG627_20075) - 4588017..4588667 (-) 651 WP_329067027.1 phosphatase PAP2 family protein -
  OG627_RS20075 (OG627_20080) - 4588839..4589759 (+) 921 WP_329067029.1 hypothetical protein -
  OG627_RS20080 (OG627_20085) disA 4589878..4591002 (-) 1125 WP_329067031.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG627_RS20085 (OG627_20090) radA/sms 4591047..4592456 (-) 1410 WP_329067033.1 DNA repair protein RadA Machinery gene
  OG627_RS20090 (OG627_20095) - 4592666..4594543 (+) 1878 WP_329072825.1 sigma-70 family RNA polymerase sigma factor -
  OG627_RS20095 (OG627_20100) - 4594687..4595562 (-) 876 WP_329067035.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40289.19 Da        Isoelectric Point: 5.1128

>NTDB_id=679486 OG627_RS20080 WP_329067031.1 4589878..4591002(-) (disA) [Streptomyces sp. NBC_01429]
MAANDRASAPGKSGAGSGNEALMRATLSAVAPGMGLRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDITKILRAGVQLVPESSIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLELVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVDPERDLVARDYVPEPTAKRSRTVDEALVELHGLTHPELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=679486 OG627_RS20080 WP_329067031.1 4589878..4591002(-) (disA) [Streptomyces sp. NBC_01429]
GTGGCAGCCAACGACCGGGCATCAGCTCCCGGAAAATCCGGCGCGGGCTCCGGCAACGAAGCGCTGATGCGCGCCACCCT
GAGCGCTGTCGCGCCGGGTATGGGCCTGCGCGACGGGCTAGAGCGGATCCTGCGCGGCAACACCGGCGGTCTCATCGTCC
TGGGCATGGACAAGACCGTCGAATCGATGTGCACGGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGCCTGCGC
GAGCTGGCCAAGCTGGACGGCGCGCTCATTCTCGACAAGGACATCACCAAGATTCTGCGGGCCGGCGTGCAGCTGGTCCC
GGAGTCCTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTGTCGAAGCAGTGCGGCTTCCCGG
TGGTCTCCGTATCGCAGTCGATGCGGCTGATCGCGCTGTATGTGAACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCGACACTGGAGCGGTACAAGCTGCGGCTGGACGAGGTCGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTGGCGCAGCGGCTGGAGCTGGTGCGCCGGATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTTCTCTCGCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGATCCGGAGCGGGACCTCGTCGCGCGCGACTACGTTCCCGAGCCGACCGCGAAGCGCTCGCGCACGGTCGACGA
GGCTTTGGTCGAGCTGCACGGGCTCACCCATCCCGAGCTGCTCGAACTGCCCATCGTGGCGCGGGCGCTGGGCTACAGCG
GCTCGCCCGAGACGCTGGACTCGGCGGTCTCGCCGCGCGGTTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCC
ATCATCGAGCGGCTGGTCGAGCACTTCGGCGGGTTGCAGAAGCTGCTGGCGGCGAGTGTGGACGATCTCCAGACGGTCGA
CGGTGTCGGCGAGGCGCGGGCCAGGAGCGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433