Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   MZN67_RS13410 Genome accession   NZ_CP096116
Coordinates   3005513..3006172 (-) Length   219 a.a.
NCBI ID   WP_011216518.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain DFS-2111020037     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3000513..3011172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN67_RS13395 (MZN67_13350) - 3001637..3002296 (+) 660 WP_027266287.1 hypothetical protein -
  MZN67_RS13400 (MZN67_13355) lcl 3002464..3003621 (+) 1158 WP_374152063.1 collagen-like adhesin Lcl -
  MZN67_RS13405 (MZN67_13360) uvrC 3003645..3005501 (-) 1857 WP_061691912.1 excinuclease ABC subunit UvrC -
  MZN67_RS13410 (MZN67_13365) letA 3005513..3006172 (-) 660 WP_011216518.1 two-component system response regulator LetA Regulator
  MZN67_RS13415 (MZN67_13370) phhA 3006297..3007115 (-) 819 WP_061691913.1 phenylalanine 4-monooxygenase -
  MZN67_RS13420 (MZN67_13375) - 3007557..3008654 (+) 1098 WP_061691914.1 molybdopterin-binding protein -
  MZN67_RS13425 (MZN67_13380) cgtA 3008613..3009638 (-) 1026 WP_014842696.1 Obg family GTPase CgtA -
  MZN67_RS13430 (MZN67_13385) rpmA 3009853..3010131 (-) 279 WP_010948350.1 50S ribosomal protein L27 -
  MZN67_RS13435 (MZN67_13390) rplU 3010144..3010455 (-) 312 WP_010948351.1 50S ribosomal protein L21 -

Sequence

Protein


Download         Length: 219 a.a.        Molecular weight: 24556.49 Da        Isoelectric Point: 5.1572

>NTDB_id=679477 MZN67_RS13410 WP_011216518.1 3005513..3006172(-) (letA) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
MIKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGIDGWEVTRRLKKTNPNIKVIA
VTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAKGEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMI
TSGMNVQDIADRLFLSSKTINGYRYRMFEKLGIKNDVELTYLAMKHRIIEHPNDLSQDD

Nucleotide


Download         Length: 660 bp        

>NTDB_id=679477 MZN67_RS13410 WP_011216518.1 3005513..3006172(-) (letA) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
TTGATTAAAGTATTAATTGTTGATGACCATGCATTGGTTAGAATGGGCATTCGACGATTGCTTGAAGATATGTCGGATGT
TGATGTGGTTGCAGATGCTGAAAGTGGTGAGCAGGCTTTGGCCTATGTGAAAACCCACTCCCCTGATGTCGTATTGTTAG
ACATGAAAATGCCTGGGATAGATGGGTGGGAAGTGACACGTCGCTTAAAAAAAACAAACCCAAATATTAAAGTCATAGCT
GTTACAGCTATTTGCTCAGATCCTCTCCCTACTCGAGTATTGCAATTAGGCGCTATGGGATACCTTACTAAAGAATCAGG
GGCAGAGGAAATGGCTGCAGCAATTCGTAAAGTGGCTAAAGGTGAGAAATATCTTAGTGCCGAGATAGCACAAAAAATGG
CAATTAATAGTCTCCAGGAGTCTCAGGATTCCCCCTTTGATTTATTGTCTGAAAGAGAAATGCAAGTCATGTTGATGATT
ACTAGCGGCATGAATGTACAAGACATTGCTGATAGATTATTTTTAAGTAGTAAAACCATCAATGGCTATCGATATAGGAT
GTTTGAAAAATTAGGGATTAAAAATGATGTAGAGCTTACTTATTTGGCTATGAAGCACCGCATTATTGAGCACCCCAATG
ATTTGTCACAAGATGATTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(148-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

99.543

100

0.995
  letA Legionella pneumophila strain ERS1305867

99.543

100

0.995