Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC   Type   Machinery gene
Locus tag   MZN67_RS11685 Genome accession   NZ_CP096116
Coordinates   2618682..2619386 (+) Length   234 a.a.
NCBI ID   WP_374152043.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain DFS-2111020037     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2613682..2624386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN67_RS11660 (MZN67_11630) - 2614914..2615792 (+) 879 WP_038839266.1 lpg2327 family Dot/Icm T4SS effector -
  MZN67_RS11665 (MZN67_11635) lem22 2616056..2616439 (+) 384 WP_038839268.1 Dot/Icm T4SS effector Lem22 -
  MZN67_RS11670 (MZN67_11640) - 2616633..2616863 (+) 231 WP_010948035.1 exodeoxyribonuclease VII small subunit -
  MZN67_RS11675 (MZN67_11645) - 2616844..2617740 (+) 897 WP_161504603.1 polyprenyl synthetase family protein -
  MZN67_RS11680 (MZN67_11650) bioC 2617784..2618638 (-) 855 WP_038839276.1 malonyl-ACP O-methyltransferase BioC -
  MZN67_RS11685 (MZN67_11655) comFC 2618682..2619386 (+) 705 WP_374152043.1 ComF family protein Machinery gene
  MZN67_RS11690 (MZN67_11660) - 2619415..2620488 (-) 1074 WP_161504948.1 RIP metalloprotease -
  MZN67_RS11695 (MZN67_11665) - 2620545..2620823 (-) 279 WP_010948040.1 hypothetical protein -
  MZN67_RS11700 (MZN67_11670) - 2620862..2621017 (+) 156 WP_162096598.1 hypothetical protein -
  MZN67_RS11705 (MZN67_11675) hemA 2621141..2622415 (+) 1275 WP_027225189.1 glutamyl-tRNA reductase -
  MZN67_RS11710 (MZN67_11680) prfA 2622399..2623487 (+) 1089 WP_010948042.1 peptide chain release factor 1 -
  MZN67_RS11715 (MZN67_11685) prmC 2623480..2624343 (+) 864 WP_161504947.1 peptide chain release factor N(5)-glutamine methyltransferase -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 26762.38 Da        Isoelectric Point: 9.2792

>NTDB_id=679473 MZN67_RS11685 WP_374152043.1 2618682..2619386(+) (comFC) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
MLQKFLSITQNLRLPSICTLCNQFHKSQLAVCSNCMEFMKQIGSCCQYCAYPLSDDTYLVCGQCVRKRPSFDSAYIAYRF
EEPLRSLIHQFKYHNGLYLASFLKQLLLNALPKSALKPDCLIPVPMHPKRLKRRGFNQAAVLTRLLARQLNIPYDLYYCQ
KIINTASQANLDGEQRRKNLRHAFYVPPVTYEHVMIVDDLLTTGSTANEMAHTLKNAGVKRVDICCCARAVTKN

Nucleotide


Download         Length: 705 bp        

>NTDB_id=679473 MZN67_RS11685 WP_374152043.1 2618682..2619386(+) (comFC) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
GTGCTCCAAAAATTCTTAAGTATAACACAGAACTTACGTTTACCTTCAATATGCACTCTTTGCAACCAGTTCCACAAAAG
CCAACTTGCAGTTTGCTCTAATTGCATGGAGTTTATGAAACAAATTGGATCATGCTGTCAGTACTGTGCCTACCCCCTTT
CTGATGATACGTATCTGGTTTGTGGTCAATGCGTTAGAAAAAGGCCCTCCTTTGATAGTGCTTATATAGCGTATCGTTTT
GAAGAGCCTCTGCGTAGTTTAATACATCAGTTTAAATACCATAATGGCCTTTATCTGGCCTCGTTTCTAAAGCAATTACT
TCTTAATGCCTTACCCAAAAGCGCATTGAAACCAGATTGTCTAATTCCCGTTCCCATGCATCCCAAACGATTAAAACGAA
GGGGATTTAACCAGGCTGCTGTATTAACCAGATTATTAGCTCGTCAATTAAACATCCCTTATGATTTATATTATTGTCAA
AAAATAATCAATACCGCTTCACAAGCCAACCTTGATGGAGAGCAACGAAGAAAAAATTTACGTCATGCTTTTTATGTACC
ACCTGTAACTTATGAACACGTCATGATTGTTGATGACTTATTAACCACAGGCAGCACAGCCAATGAAATGGCACATACAT
TAAAAAATGCCGGAGTTAAGAGAGTAGATATATGTTGTTGTGCGCGGGCTGTAACTAAGAACTAA

Domains

Predicted by InterproScan.

Phosphoribosyl transferase domain (Pribosyltran)

(140-229)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC Legionella pneumophila str. Paris

99.145

100

0.991
  comFC Legionella pneumophila strain ERS1305867

98.98

83.761

0.829