Detailed information    

insolico Bioinformatically predicted

Overview

Name   lpp1976   Type   Machinery gene
Locus tag   MZN67_RS09865 Genome accession   NZ_CP096116
Coordinates   2205658..2206215 (-) Length   185 a.a.
NCBI ID   WP_374151957.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain DFS-2111020037     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2200658..2211215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN67_RS09840 (MZN67_09805) - 2200809..2201384 (-) 576 WP_230309488.1 hypothetical protein -
  MZN67_RS09845 (MZN67_09810) - 2201651..2202301 (-) 651 WP_374151956.1 lysoplasmalogenase -
  MZN67_RS09850 (MZN67_09815) - 2202381..2202881 (-) 501 WP_061691666.1 hypothetical protein -
  MZN67_RS09855 (MZN67_09820) - 2203374..2204234 (+) 861 WP_027265082.1 polysaccharide deacetylase family protein -
  MZN67_RS09860 (MZN67_09825) - 2204352..2205548 (-) 1197 WP_161514349.1 murein transglycosylase A -
  MZN67_RS09865 (MZN67_09830) lpp1976 2205658..2206215 (-) 558 WP_374151957.1 hypothetical protein Machinery gene
  MZN67_RS09870 (MZN67_09835) lpp1977 2206212..2207018 (-) 807 WP_318793894.1 hypothetical protein Machinery gene
  MZN67_RS09875 (MZN67_09840) lpp1978 2206957..2207271 (-) 315 WP_318793895.1 type II secretion system protein Machinery gene
  MZN67_RS09880 (MZN67_09845) hisC 2207431..2208540 (+) 1110 WP_027265077.1 histidinol-phosphate transaminase -
  MZN67_RS09885 (MZN67_09850) - 2208577..2208918 (+) 342 WP_027265076.1 4a-hydroxytetrahydrobiopterin dehydratase -
  MZN67_RS09890 (MZN67_09855) secF 2209111..2210028 (-) 918 WP_010947716.1 protein translocase subunit SecF -

Sequence

Protein


Download         Length: 185 a.a.        Molecular weight: 21573.93 Da        Isoelectric Point: 6.9395

>NTDB_id=679468 MZN67_RS09865 WP_374151957.1 2205658..2206215(-) (lpp1976) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
MKKTDSGFILLMTLCITFLMSLLVLASLQQISLQYKALNSQETFHQNFYQLEHWMMRLARSPLLYAGMDCYVQKDYGANK
IANELVNNKGCLLILNQKKYRYFIEDLNEFSCLVLNKDGQKYASHHFRFTVLQDEEHGESAIMQLRFIKLGSNLSSCPEE
EIQVKEGVSSWRYLPDYKNFEILTG

Nucleotide


Download         Length: 558 bp        

>NTDB_id=679468 MZN67_RS09865 WP_374151957.1 2205658..2206215(-) (lpp1976) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
ATGAAAAAAACCGATTCCGGTTTCATTCTTTTAATGACGCTCTGTATAACTTTCTTGATGAGCTTATTGGTTTTGGCAAG
CCTCCAACAGATATCCTTGCAATACAAAGCACTCAATTCACAGGAGACATTTCATCAAAATTTCTATCAGTTGGAACATT
GGATGATGCGACTCGCGCGTTCACCGTTATTGTATGCAGGTATGGATTGTTATGTGCAAAAAGATTATGGAGCTAATAAA
ATAGCAAACGAGTTGGTTAACAATAAAGGATGTTTGCTCATATTAAATCAGAAAAAATACAGATATTTTATTGAGGACCT
TAACGAGTTTTCTTGCTTGGTTCTTAATAAAGATGGGCAGAAATATGCTTCTCACCATTTTAGATTCACCGTATTACAAG
ACGAGGAGCATGGCGAATCTGCTATCATGCAATTAAGGTTTATCAAATTGGGTAGCAATTTGTCCTCTTGTCCAGAAGAG
GAAATACAGGTGAAGGAAGGGGTAAGCAGCTGGAGATACTTGCCAGATTATAAAAATTTTGAAATATTAACTGGTTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lpp1976 Legionella pneumophila str. Paris

97.838

100

0.978
  lpp1976 Legionella pneumophila strain ERS1305867

96.757

100

0.968