Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilE   Type   Machinery gene
Locus tag   MZN67_RS03225 Genome accession   NZ_CP096116
Coordinates   683991..684440 (-) Length   149 a.a.
NCBI ID   WP_010946364.1    Uniprot ID   Q5ZXV4
Organism   Legionella pneumophila subsp. pneumophila strain DFS-2111020037     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 678991..689440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN67_RS03205 (MZN67_03170) - 679265..679657 (-) 393 WP_011214843.1 hypothetical protein -
  MZN67_RS03210 (MZN67_03175) - 679794..680171 (+) 378 WP_027220485.1 hypothetical protein -
  MZN67_RS03215 (MZN67_03180) - 680373..681680 (+) 1308 WP_061692678.1 tetratricopeptide repeat protein -
  MZN67_RS03220 (MZN67_03185) comEC 681706..683913 (-) 2208 WP_061692679.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MZN67_RS03225 (MZN67_03190) pilE 683991..684440 (-) 450 WP_010946364.1 type IV pilin protein Machinery gene
  MZN67_RS03230 (MZN67_03195) - 684452..687961 (-) 3510 WP_374152202.1 pilus assembly protein -
  MZN67_RS03235 (MZN67_03200) - 687974..688486 (-) 513 WP_038837643.1 pilus assembly protein -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 16296.57 Da        Isoelectric Point: 7.6922

>NTDB_id=679445 MZN67_RS03225 WP_010946364.1 683991..684440(-) (pilE) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
MLSHVHFMKNSRMKQSAFTLVEVLISMVIMGILVSIAYPSYLQYIQKSRRADAHATLTQDQIILERCYSQNFSYAAACGA
LPAFPQTTPNGYYTINISNLTATTYTLTATPVGTQAKDTECASMSINQANVKTAVDSSANAQPECWNPG

Nucleotide


Download         Length: 450 bp        

>NTDB_id=679445 MZN67_RS03225 WP_010946364.1 683991..684440(-) (pilE) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
ATGCTCAGTCATGTACATTTTATGAAGAATAGCCGTATGAAACAATCGGCGTTTACCCTGGTTGAAGTTCTGATCAGCAT
GGTCATTATGGGAATTCTGGTTTCAATTGCCTATCCATCCTATTTACAATATATCCAAAAATCCCGTCGTGCCGATGCTC
ACGCCACATTGACACAAGATCAAATTATTTTAGAACGCTGCTACTCACAGAATTTTTCTTATGCTGCGGCGTGTGGCGCC
TTACCAGCATTTCCGCAAACAACTCCGAACGGATACTATACTATCAATATTTCAAACCTGACAGCCACAACGTATACCTT
AACTGCAACCCCTGTTGGAACTCAAGCCAAAGATACCGAGTGCGCCAGCATGTCAATTAACCAGGCCAATGTAAAAACAG
CAGTAGATTCCTCTGCCAATGCGCAACCAGAATGCTGGAATCCCGGTTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(12-38)

Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS)

(39-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5ZXV4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Legionella pneumophila str. Paris

100

100

1
  pilE Legionella pneumophila strain ERS1305867

100

100

1