Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   M0D62_RS13105 Genome accession   NZ_CP096114
Coordinates   2683514..2684179 (-) Length   221 a.a.
NCBI ID   WP_000697875.1    Uniprot ID   -
Organism   Staphylococcus argenteus strain MRSA-139-14-168     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2678514..2689179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0D62_RS13090 (M0D62_13080) - 2679754..2681757 (-) 2004 WP_047436049.1 ABC transporter permease -
  M0D62_RS13095 (M0D62_13085) - 2681754..2682509 (-) 756 WP_031788273.1 ABC transporter ATP-binding protein -
  M0D62_RS13100 (M0D62_13090) braS 2682616..2683503 (-) 888 WP_047436051.1 sensor histidine kinase Regulator
  M0D62_RS13105 (M0D62_13095) braR 2683514..2684179 (-) 666 WP_000697875.1 response regulator transcription factor Regulator
  M0D62_RS13110 (M0D62_13100) - 2684215..2684400 (-) 186 WP_047436054.1 hypothetical protein -
  M0D62_RS13115 (M0D62_13105) - 2684590..2684817 (-) 228 Protein_2514 ATP-binding protein -
  M0D62_RS13120 (M0D62_13110) - 2684804..2685131 (+) 328 Protein_2515 transposase -
  M0D62_RS13125 (M0D62_13115) - 2685323..2685877 (-) 555 WP_047436056.1 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein -
  M0D62_RS13130 (M0D62_13120) - 2686056..2686970 (+) 915 WP_031788278.1 alpha/beta hydrolase -
  M0D62_RS13135 (M0D62_13125) - 2686991..2687629 (+) 639 WP_031788279.1 SDR family oxidoreductase -
  M0D62_RS13140 (M0D62_13130) - 2687700..2688410 (+) 711 WP_047436057.1 dihydrofolate reductase family protein -
  M0D62_RS13145 (M0D62_13135) - 2688425..2689177 (+) 753 WP_031788280.1 SDR family NAD(P)-dependent oxidoreductase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25270.26 Da        Isoelectric Point: 4.7961

>NTDB_id=679435 M0D62_RS13105 WP_000697875.1 2683514..2684179(-) (braR) [Staphylococcus argenteus strain MRSA-139-14-168]
MKILIVEDDFVIAESLASELKKWNYDVVVAEQFDNITAVFNNHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIMFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVVNDTLTVKGCTLILDEAKVAYQGESIQLSLTELQILK
LLFQSEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLSTIGLNDFITTKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=679435 M0D62_RS13105 WP_000697875.1 2683514..2684179(-) (braR) [Staphylococcus argenteus strain MRSA-139-14-168]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCGGAAAGTTTAGCATCTGAATTAAAAAAATGGAATTATGATGT
GGTTGTGGCAGAACAGTTTGATAATATAACAGCCGTTTTTAACAATCATCAACCACAGCTTGTGCTGTTAGATATCAATT
TACCTACTTTAAATGGTTTTCATTGGTGCCAAGAAATACGCAAAACATCAAATGTACCTATCATGTTTATTAGTTCGCGT
ATTGATAACATGGATCAAATTATGGCTATACAAATGGGTGGCGATGATTTTATTGAAAAACCATTCAATTTGTCATTAAC
TATTGCTAAAATTCAAGCGCTTTTAAGACGTACTTATGATCTAACAGTAGTCAATGATACGCTGACAGTCAAAGGGTGTA
CGCTAATATTAGATGAAGCTAAGGTTGCTTATCAAGGGGAGAGTATACAGCTGTCTTTGACGGAATTACAAATTTTAAAA
TTGTTGTTCCAAAGCGAAGACAAGTATGTGAGTCGAACAGCTTTAATTGAAAAATGCTGGGAGTCTGAAAACTTCATAGA
TGATAATACATTAGCAGTAAATATGACACGTCTACGTAAAAAATTAAGTACTATAGGCCTCAATGATTTTATCACTACCA
AGAAAAATGTTGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

90.95

100

0.91