Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   M0D62_RS13100 Genome accession   NZ_CP096114
Coordinates   2682616..2683503 (-) Length   295 a.a.
NCBI ID   WP_047436051.1    Uniprot ID   -
Organism   Staphylococcus argenteus strain MRSA-139-14-168     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2677616..2688503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0D62_RS13085 (M0D62_13075) - 2677827..2678324 (-) 498 WP_047436045.1 glutathione peroxidase -
  M0D62_RS13620 - 2678334..2678585 (-) 252 WP_047436046.1 hypothetical protein -
  M0D62_RS13090 (M0D62_13080) - 2679754..2681757 (-) 2004 WP_047436049.1 ABC transporter permease -
  M0D62_RS13095 (M0D62_13085) - 2681754..2682509 (-) 756 WP_031788273.1 ABC transporter ATP-binding protein -
  M0D62_RS13100 (M0D62_13090) braS 2682616..2683503 (-) 888 WP_047436051.1 sensor histidine kinase Regulator
  M0D62_RS13105 (M0D62_13095) braR 2683514..2684179 (-) 666 WP_000697875.1 response regulator transcription factor Regulator
  M0D62_RS13110 (M0D62_13100) - 2684215..2684400 (-) 186 WP_047436054.1 hypothetical protein -
  M0D62_RS13115 (M0D62_13105) - 2684590..2684817 (-) 228 Protein_2514 ATP-binding protein -
  M0D62_RS13120 (M0D62_13110) - 2684804..2685131 (+) 328 Protein_2515 transposase -
  M0D62_RS13125 (M0D62_13115) - 2685323..2685877 (-) 555 WP_047436056.1 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein -
  M0D62_RS13130 (M0D62_13120) - 2686056..2686970 (+) 915 WP_031788278.1 alpha/beta hydrolase -
  M0D62_RS13135 (M0D62_13125) - 2686991..2687629 (+) 639 WP_031788279.1 SDR family oxidoreductase -
  M0D62_RS13140 (M0D62_13130) - 2687700..2688410 (+) 711 WP_047436057.1 dihydrofolate reductase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34019.50 Da        Isoelectric Point: 6.7553

>NTDB_id=679434 M0D62_RS13100 WP_047436051.1 2682616..2683503(-) (braS) [Staphylococcus argenteus strain MRSA-139-14-168]
MTFIKKIAQEISIVVVIVALFGLMFYLYRLPLEAFLLTLAIVSLLLLIYIGIMYLSFVKTISQQQQIENLETALYQLKND
QLEYKNDIESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEIIQIDNYTSLALSYLKLLNETSDISVAQISINDLIR
PIIMKYSIQFIDQKTKIHYEPCHCMVLTDVRWTSLMIEQLINNALKYARGKDIWIEYDEKSKQLHIKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSTGIGLFIVKQVSNHTNHPVSVVSKQNQGTTFTIQFPNE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=679434 M0D62_RS13100 WP_047436051.1 2682616..2683503(-) (braS) [Staphylococcus argenteus strain MRSA-139-14-168]
ATGACGTTTATTAAAAAAATTGCTCAGGAAATAAGTATAGTTGTTGTTATTGTAGCTTTGTTTGGCTTGATGTTTTATCT
ATATCGATTGCCACTAGAAGCTTTTTTATTGACGCTTGCAATCGTTTCATTGTTATTACTTATTTACATAGGAATTATGT
ACTTAAGCTTTGTTAAGACTATAAGTCAACAGCAACAAATTGAAAACTTAGAAACAGCATTGTATCAACTTAAAAATGAT
CAGCTTGAATATAAAAATGATATAGAAAGTTATTTTTTGACATGGGTGCACCAAATGAAAACGCCAATTACTGCGGCACA
ACTATTACTTGAAAGAGATGAACCAAATGTTGTGAATCGTGTTCGCCAAGAAATTATTCAAATAGATAACTATACAAGTT
TAGCGTTAAGTTATTTAAAATTATTAAATGAAACATCTGATATATCAGTCGCTCAAATATCAATTAACGATTTAATTAGA
CCAATTATTATGAAATATTCGATACAGTTTATTGATCAAAAAACAAAAATACATTATGAACCTTGTCATTGTATGGTATT
AACCGATGTACGATGGACTTCTTTAATGATAGAACAGCTAATTAATAATGCATTAAAATATGCTAGAGGTAAAGATATAT
GGATTGAATATGATGAGAAATCAAAACAATTACATATTAAAGACAATGGTATTGGCATTAGTGAAGCGGACTTGCCAAAA
ATATTTGATAAAGGCTATTCAGGATATAATGGACAACGCCAAAGTAATTCAACGGGCATCGGCTTATTTATTGTAAAGCA
AGTTTCCAATCATACGAATCATCCTGTTTCAGTCGTATCTAAACAGAATCAAGGTACAACATTTACGATTCAATTTCCAA
ATGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

88.475

100

0.885