Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   M0D62_RS05015 Genome accession   NZ_CP096114
Coordinates   1021548..1022117 (-) Length   189 a.a.
NCBI ID   WP_000287261.1    Uniprot ID   A0A7U7JTQ7
Organism   Staphylococcus argenteus strain MRSA-139-14-168     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1016548..1027117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0D62_RS04995 (M0D62_04990) - 1018051..1019409 (+) 1359 WP_047434072.1 TrkH family potassium uptake protein -
  M0D62_RS05000 (M0D62_04995) - 1019548..1021056 (+) 1509 WP_047526292.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  M0D62_RS05015 (M0D62_05010) comK/comK1 1021548..1022117 (-) 570 WP_000287261.1 competence protein ComK Regulator
  M0D62_RS05020 (M0D62_05015) - 1022327..1022545 (+) 219 WP_000876831.1 IDEAL domain-containing protein -
  M0D62_RS05025 (M0D62_05020) - 1022626..1023612 (-) 987 WP_000668810.1 lipoate--protein ligase -
  M0D62_RS05030 (M0D62_05025) - 1023807..1023983 (+) 177 WP_000214898.1 YkvS family protein -
  M0D62_RS05035 (M0D62_05030) - 1023998..1024600 (+) 603 WP_047434079.1 CPBP family glutamic-type intramembrane protease -
  M0D62_RS05040 (M0D62_05035) - 1025232..1025504 (+) 273 WP_080724756.1 lactococcin 972 family bacteriocin -

Sequence

Protein


Download         Length: 189 a.a.        Molecular weight: 22637.86 Da        Isoelectric Point: 9.6092

>NTDB_id=679406 M0D62_RS05015 WP_000287261.1 1021548..1022117(-) (comK/comK1) [Staphylococcus argenteus strain MRSA-139-14-168]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQHENIWLNMHYIENIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMVS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=679406 M0D62_RS05015 WP_000287261.1 1021548..1022117(-) (comK/comK1) [Staphylococcus argenteus strain MRSA-139-14-168]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGATGATCAAAGAAA
TGGTAGTGAAATTATCCGGTTTGATAAAACGCGTATACAAAATCCATTTAAAGTCCAGAAAATCATAGAACGCTCTTGCA
AATTTTATGGTAATACATACCTTGGCAAGAAAGCAGAAACAAACCGCATTACTGGTATTTCTAGTAAACCACCTATTTTA
CTAACACCCTTATTTCCAACTTATTTTTTCCCAACTCATTCTGACAGACAACACGAAAACATTTGGCTAAATATGCATTA
TATAGAAAATATTAAAGAATTAAAAAATCGTAAATGTAAAGTAACTTTTATTAATAACGAATCAATTATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTACTATATGGTAGATAAACAATCTCGTATGGTTTCT
AAAAATCCCGATCAACCTATAGATTATAATAAAGCCACATTAAACGTATTTGAAGCATTAACACGTTATTCCCTATTCGA
AGATAAATAA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(5-156)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JTQ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

98.413

100

0.984
  comK/comK1 Staphylococcus aureus N315

98.413

100

0.984