Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG467_RS21615 Genome accession   NZ_CP109589
Coordinates   4825669..4826793 (+) Length   374 a.a.
NCBI ID   WP_329571522.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01361     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4820669..4831793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG467_RS21600 (OG467_21645) - 4821254..4822120 (+) 867 WP_329581721.1 hypothetical protein -
  OG467_RS21605 (OG467_21650) - 4822153..4823871 (-) 1719 WP_329571519.1 hypothetical protein -
  OG467_RS21610 (OG467_21655) radA/sms 4824116..4825525 (+) 1410 WP_100597753.1 DNA repair protein RadA Machinery gene
  OG467_RS21615 (OG467_21660) disA 4825669..4826793 (+) 1125 WP_329571522.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG467_RS21620 (OG467_21665) - 4827121..4827921 (-) 801 WP_329571524.1 hypothetical protein -
  OG467_RS21625 (OG467_21670) - 4828107..4828748 (+) 642 WP_329571525.1 phosphatase PAP2 family protein -
  OG467_RS21630 (OG467_21675) - 4828749..4829396 (-) 648 WP_329571527.1 response regulator transcription factor -
  OG467_RS21635 (OG467_21680) - 4829393..4830991 (-) 1599 WP_329571528.1 histidine kinase -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40271.07 Da        Isoelectric Point: 4.9269

>NTDB_id=679260 OG467_RS21615 WP_329571522.1 4825669..4826793(+) (disA) [Streptomyces sp. NBC_01361]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVSFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELDALTHAELLELSTVARALGYTGSPETLDSAISPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=679260 OG467_RS21615 WP_329571522.1 4825669..4826793(+) (disA) [Streptomyces sp. NBC_01361]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGCAAGTCCGGCGGGAGCTCCGGCGCCGATGGGCTGATGCGCGCCTCACT
GAGCGCCGTCGCGCCCGGTACGGCGCTGCGTGACGGCCTCGAGCGAATCCTCCGCGGCAACACCGGCGGACTCATCGTTC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGTACCGGCGGTTTCATCCTGGACGTCGAGTTCACCGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTCCAGTTGGTGCC
CGACCCCACGATCCCCACGGAGGAGACGGGCACGCGGCACCGCACGGCGGACCGCGTGAGCAAGCAGGTCAGCTTCCCCG
TGGTCTCCGTGTCGCAGTCGATGCGGCTCATCGCCCTTTACGTGGACGGGCAGCGGCGCGTTCTCGAGGACTCGGCCGCG
ATTCTCTCCCGGGCGAATCAGGCGCTGGCGACTCTCGAGCGGTACAAGCTCCGCTTGGACGAGGTGGCCGGGACGCTCTC
CGCGCTCGAGATCGAGGATCTCGTTACCGTCCGCGATGTGACCGCGGTCGCGCAGCGGCTGGAGATGGTGCGGCGCATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACGGACGGGCGACTGCTGGCTCTTCAGCTCGACGAGTTGATCGCC
GGCGTCGAGCCCGAGCGGGAGCTCGTCGTTCGGGACTATGTGCCGGAGCCCACTGCCAAGCGGTCCCGGACCGTTGATGA
GGCGCTGTCCGAGCTCGATGCGCTGACGCATGCCGAGCTTCTTGAACTGTCCACTGTGGCACGCGCGTTGGGGTACACCG
GGTCTCCGGAGACCCTCGACTCGGCCATTTCACCTCGTGGGTTCCGGCTGCTGGCGAAGGTGCCCCGGCTGCCTGGGGCG
ATCATTGACCGGCTTGTCGAGCACTTTGGCGGGTTGCAGAAGCTGCTCGCCGCCAGCGTCGATGATCTGCAGACCGTGGA
CGGCGTCGGGGAGGCTCGTGCCCGGAGCGTGCGGGAAGGGCTCTCGCGGTTGGCCGAGTCTTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43