Detailed information NTG0678996

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG571_RS14905
• Genome accession: NZ_CP109575
• Coordinates: 3296330..3297628 (-)
• Length: 432 a.a.
• NCBI ID: WP_072483632.1
• Uniprot ID: A0A1K1UXB1
• Organism: Streptomyces sp. NBC_01369
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3291330..3302628

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG571_RS14885 (OG571_14855)	-	3291422..3291904 (+)	483	WP_266690914.1	response regulator	-
OG571_RS14890 (OG571_14860)	-	3291943..3292395 (+)	453	WP_241196339.1	hypothetical protein	-
OG571_RS14895 (OG571_14865)	-	3292466..3295087 (-)	2622	WP_266690913.1	valine--tRNA ligase	-
OG571_RS14900 (OG571_14870)	-	3295228..3296268 (+)	1041	WP_266690911.1	hypothetical protein	-
OG571_RS14905 (OG571_14875)	clpX	3296330..3297628 (-)	1299	WP_072483632.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG571_RS14910 (OG571_14880)	clpP	3297786..3298469 (-)	684	WP_124717721.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG571_RS14915 (OG571_14885)	-	3298547..3299152 (-)	606	WP_164495234.1	ATP-dependent Clp protease proteolytic subunit	-
OG571_RS14920 (OG571_14890)	tig	3299418..3300824 (-)	1407	WP_266690909.1	trigger factor	-
OG571_RS14935 (OG571_14905)	-	3301471..3301665 (-)	195	WP_124717718.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47229.03 Da
• Isoelectric Point: 4.8824

>NTDB_id=678996 OG571_RS14905 WP_072483632.1 3296330..3297628(-) (clpX) [Streptomyces sp. NBC_01369]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=678996 OG571_RS14905 WP_072483632.1 3296330..3297628(-) (clpX) [Streptomyces sp. NBC_01369]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGTAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAAGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCAGGCGAGAACGGCGGCGCGCAGGGCCG
TGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCGAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGGGGCCTGC
GGGCCATCATGGAGGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCCGACGTCGTCCGCAACAACGTGAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGGCGGGCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

3D structure

• AlphaFold DB: A0A1K1UXB1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509