Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   MYA84_RS03430 Genome accession   NZ_CP095872
Coordinates   711807..716306 (+) Length   1499 a.a.
NCBI ID   WP_004814767.1    Uniprot ID   N8XZX3
Organism   Acinetobacter schindleri strain H4-3-C1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 706807..721306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MYA84_RS03405 (MYA84_03400) - 707230..707889 (-) 660 WP_048882366.1 hypothetical protein -
  MYA84_RS03410 (MYA84_03405) pilG 708197..708580 (+) 384 WP_004814763.1 twitching motility response regulator PilG Regulator
  MYA84_RS03415 (MYA84_03410) - 708611..708979 (+) 369 WP_004814764.1 response regulator -
  MYA84_RS03420 (MYA84_03415) - 708985..709521 (+) 537 WP_004814765.1 chemotaxis protein CheW -
  MYA84_RS03425 (MYA84_03420) - 709566..711638 (+) 2073 WP_004814766.1 methyl-accepting chemotaxis protein -
  MYA84_RS03430 (MYA84_03425) chpA 711807..716306 (+) 4500 WP_004814767.1 Hpt domain-containing protein Regulator
  MYA84_RS03435 (MYA84_03430) - 716310..716771 (+) 462 WP_008307514.1 hypothetical protein -
  MYA84_RS03440 (MYA84_03435) dapE 716845..717981 (-) 1137 WP_103799652.1 succinyl-diaminopimelate desuccinylase -
  MYA84_RS03445 (MYA84_03440) - 718106..718255 (-) 150 WP_004814773.1 entericidin A/B family lipoprotein -
  MYA84_RS03450 (MYA84_03445) - 718394..719242 (-) 849 WP_184103718.1 DUF1853 family protein -
  MYA84_RS03455 (MYA84_03450) - 719331..719726 (+) 396 WP_004814776.1 YbaN family protein -
  MYA84_RS03460 (MYA84_03455) elsL 719731..720237 (+) 507 WP_005223013.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1499 a.a.        Molecular weight: 166970.71 Da        Isoelectric Point: 4.2285

>NTDB_id=678947 MYA84_RS03430 WP_004814767.1 711807..716306(+) (chpA) [Acinetobacter schindleri strain H4-3-C1]
MKEILKDLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELNALLPQWFATPDHQETLTTIRRHFHTLKGSGRMVGAKQA
GEIAWAVEDTLNRVLSGSIKLTPVIQKFAQATLNIYQYILYPCFKQVQPLTIDLRPVVLLGQQLQQQLSPEPALEELLLL
ADNLTAEGQLTGLELADTAEADSSIAEIAETATAERVEVAEERTDLEETVAIFVEEAEEHLATIHDFLKHENSAKQDYNG
LIRALHTLRGSSSMAQIDDICEASVKVENLFKTLVQDEIASTSKETALLQQYSEFIGDYLHLLKQGNTEKLAGISATFED
AWDTYGFTVTEQQDADQSQGMVTRLVELNIDQLLDAEFEFDKRVLEEYPDYIEALSQQAAELMVHTDNRASIGIHEFASQ
LKAAYDALLARPVLLESDYAFELFAQAHQEFIHLFDTLAAGQRVILNAEVEKLLADLSAFVQQDIEVFATDKVVETEVPA
PVESDISTAVDFTGLSQRIVADRQQQDAEDANRDFDEDLLDIFLEEADELLAGIDEDLNTWSKEPENTHSLNNLMRYLHT
LKGGANMIAATHIGSIAHELESIYERVIRQQITVTPALIQIIRLVQDNVSDRIQSIRDDKIDYPAPEAIHMLQNIQALVA
GTATATPVAAVETVEAETSVELEVIDDASESAEIVVESQALERVDGFETESVPASDEQIQEDQSGETLTAESAESMLADE
DDLQSIVEETFLEESQEILENAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMISNESIASIAYGLESAFEQFAVHHF
NSNAYDSLLQKTLKWLGQAIFDHDYNGFEQIKAALDAIEFVDVTAQLPERLTKTESLEVTTGFEFVQGDGTEPPNMMGEW
AENTSSDSSNEMIRISAELVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSE
NSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQ
RIVRQTSTTLNRPAELIVQNTEGELDRTILERLVNPFEHMLRNAIDHGLEDTAERLALNKPEVGSIVLNISRQGTDVIIS
FSDDGKGIDAESIRAKAISLDLIKAEQQVDQEELLQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKTLGGHVSVNSELG
KGTTFTIRVPTTVAVSDALMVKAGDQQFAISLAQIDRIVRIAPATLETYFNSKDDYFKIDGVNYKLRYLSEFVSNQPIPR
LNNVAHSLPVLLIKGNGGQSIALLVDQLVGSRAQIVVKPIGQQFASVGVIAGATILGDGQVCLILDGQNIARQVQATQRI
KQLSDQQDLSRRGNARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTN
LVRHHDIHRNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANVQELIAAQQG

Nucleotide


Download         Length: 4500 bp        

>NTDB_id=678947 MYA84_RS03430 WP_004814767.1 711807..716306(+) (chpA) [Acinetobacter schindleri strain H4-3-C1]
ATGAAAGAAATATTAAAAGATCTAGTTGAAACAACAGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCTGAAATTTT
AGAGATATTTGTCGAAGAGATTGAAGAAATCTTTGTCGAGTTAAATGCTTTATTGCCACAGTGGTTTGCCACACCAGATC
ATCAAGAAACATTAACCACCATTCGCCGCCACTTCCATACGCTGAAAGGTTCGGGTCGTATGGTCGGTGCGAAGCAGGCG
GGTGAAATTGCCTGGGCAGTTGAAGATACTTTGAACCGTGTACTTTCAGGTTCAATCAAATTAACACCAGTCATTCAGAA
GTTTGCGCAAGCAACTTTAAATATCTATCAATATATATTGTATCCATGCTTTAAGCAGGTACAGCCATTAACCATTGATT
TACGTCCAGTCGTACTTTTAGGACAACAATTACAACAGCAATTGAGTCCAGAACCGGCACTTGAAGAATTATTGCTACTT
GCGGACAATCTGACTGCTGAAGGTCAGCTAACAGGTCTTGAACTTGCGGATACTGCAGAAGCAGATTCATCAATAGCAGA
GATTGCTGAAACTGCTACCGCAGAACGAGTAGAAGTTGCTGAAGAACGTACTGACCTTGAAGAAACGGTAGCGATCTTTG
TTGAAGAAGCCGAGGAACATCTGGCGACAATCCATGATTTCCTGAAACACGAAAATAGTGCCAAGCAAGACTATAATGGC
CTGATTCGTGCATTGCATACCCTGCGTGGCAGCTCTTCTATGGCACAGATTGATGATATCTGTGAGGCCAGCGTTAAAGT
AGAGAATTTATTTAAAACGCTGGTTCAGGATGAAATTGCTTCAACTTCCAAAGAAACAGCACTATTACAGCAATATTCAG
AATTTATCGGTGATTATTTACATCTATTGAAACAGGGTAACACTGAAAAGCTGGCAGGGATTTCTGCTACTTTTGAGGAT
GCCTGGGATACCTATGGCTTTACTGTGACTGAACAGCAGGATGCTGATCAATCTCAAGGTATGGTTACACGTCTGGTTGA
ACTGAATATTGATCAGTTACTGGATGCCGAATTTGAGTTTGATAAGCGGGTACTTGAAGAATATCCAGATTATATTGAAG
CTTTAAGCCAGCAAGCCGCAGAGCTGATGGTACATACGGATAACCGTGCATCGATCGGTATTCATGAATTCGCATCCCAG
TTAAAAGCAGCTTATGATGCTTTGCTGGCGAGACCGGTCTTGCTTGAAAGTGATTATGCCTTTGAACTTTTTGCACAGGC
ACACCAGGAATTTATTCACCTGTTCGATACGCTCGCGGCAGGACAGCGGGTGATTTTGAATGCCGAAGTTGAAAAACTTC
TGGCGGATCTGTCTGCCTTTGTACAGCAAGACATCGAAGTATTCGCTACAGACAAAGTTGTTGAAACTGAGGTACCTGCG
CCAGTAGAGTCAGATATATCCACAGCAGTTGATTTTACTGGGCTCAGCCAGCGTATTGTAGCTGATCGTCAGCAGCAGGA
CGCTGAAGATGCGAACCGTGATTTCGATGAAGACTTGCTGGATATCTTCCTGGAAGAAGCAGATGAGTTGCTGGCAGGCA
TTGATGAAGACCTGAATACCTGGTCCAAAGAACCTGAAAATACCCACTCATTGAACAATCTGATGCGTTATTTGCATACC
CTGAAGGGGGGTGCAAACATGATTGCTGCCACGCATATCGGTTCGATTGCACATGAGCTGGAAAGTATTTATGAGCGCGT
GATCCGTCAGCAGATTACCGTAACACCTGCATTGATCCAGATTATCCGCCTGGTACAGGATAACGTGTCAGACCGTATCC
AGAGTATTCGTGATGATAAGATTGATTATCCGGCACCTGAAGCTATTCATATGCTGCAAAATATCCAGGCACTTGTGGCT
GGAACAGCTACTGCAACTCCGGTAGCTGCTGTTGAGACGGTAGAAGCAGAGACTTCTGTAGAACTAGAAGTTATTGACGA
TGCATCGGAATCTGCTGAGATCGTTGTGGAATCACAAGCGCTTGAGCGAGTAGACGGCTTTGAAACTGAATCTGTTCCTG
CATCAGATGAGCAAATTCAGGAAGATCAGTCAGGCGAAACACTTACTGCTGAGTCAGCTGAATCTATGCTTGCTGATGAA
GATGATCTACAATCGATTGTTGAAGAAACCTTCCTGGAAGAATCGCAAGAGATTCTGGAAAATGCAGAAAAATTACTGAA
CCAATGGTTCGATCAGCGAAGTGACCGTAGCTTATTGCTGCAACTTCAGCGTGCTGCCCACAGTATCAAGGGTGGCGCCC
GCATGATCAGCAATGAAAGCATCGCAAGTATTGCTTATGGTCTGGAAAGTGCATTTGAACAGTTTGCTGTTCATCATTTT
AACTCCAATGCCTATGACAGTCTGCTGCAAAAGACCCTGAAATGGCTGGGTCAAGCCATTTTTGATCATGATTACAATGG
TTTTGAGCAAATCAAAGCAGCGCTGGATGCGATTGAGTTTGTAGATGTCACTGCACAGCTACCTGAACGTCTGACCAAAA
CTGAAAGTCTGGAAGTTACAACTGGCTTCGAGTTTGTTCAGGGTGATGGTACTGAACCACCAAATATGATGGGTGAGTGG
GCTGAGAACACCTCAAGCGATAGCAGTAACGAGATGATCCGTATTTCAGCCGAACTGGTCGAGAAGATGATTGACCTGTC
AGGCGAAAATGCAATTAACCGTTCGCGTATCGAGATGGATCTGGGACAGCTCGGCAATACCTTAAATGAGATGGAACTGG
CGATCAAACGTCTGGCTGATCAGCTGCGCCGTATGGAAGGCGAGCTGGAGTCTCAGATTATTGCCAAACATGGCTCAGAA
AACTCACGCTATGCTGACTTCGACCCCTTGGAGATGGACCAATATTCATCCCTAAACCAGTTATCTAAATCTCTTGCTGA
ATCTGCATCGGACTTGGTCGACTTTAAGACCACGCTCGCGGAAAAAATCCGTGATACCGAAGGTTTGCTATTGCAACAGT
CGCGTATCCAGGCTGAGATTCAGGAAAGTCTGATGCGTACCCGTCTGGTACCATTTGACCGTATGTTGCCACGTTTACAA
CGTATTGTGCGTCAAACTTCGACCACACTGAACCGTCCGGCAGAGCTGATTGTTCAGAATACTGAAGGTGAACTCGACCG
TACCATTCTGGAACGTCTGGTAAACCCATTTGAGCACATGCTACGTAACGCGATTGACCATGGTCTGGAAGATACTGCAG
AACGGCTTGCGCTGAATAAGCCAGAAGTCGGTTCAATTGTCCTGAACATTAGCCGTCAGGGTACCGATGTCATTATCTCC
TTTAGTGATGATGGTAAGGGAATTGATGCGGAGAGTATTCGTGCTAAAGCCATCAGTCTGGACTTGATCAAAGCGGAACA
GCAGGTGGATCAGGAAGAATTGCTGCAATTCATCTTCCATCCAGGTTTCAGTACGGCTAAAGCAGTCACCCAGATTTCGG
GTCGAGGTGTTGGTCTGGACGTGGTACAAAGCGAAATCAAAACGCTGGGCGGTCACGTTTCGGTAAATTCTGAACTGGGC
AAAGGCACGACCTTTACGATTCGCGTACCGACCACTGTGGCCGTCAGTGATGCCTTAATGGTGAAAGCGGGTGACCAGCA
ATTTGCCATTTCTCTGGCACAGATTGACCGTATTGTCCGTATTGCACCAGCAACACTGGAAACTTACTTCAACAGTAAGG
ATGATTACTTCAAGATTGATGGTGTGAACTACAAGCTGCGCTATCTGTCTGAGTTTGTCTCTAATCAGCCAATTCCACGT
TTGAACAATGTTGCGCATTCATTACCAGTACTCCTTATCAAGGGTAATGGTGGTCAAAGTATCGCTTTGCTGGTGGATCA
ATTAGTTGGCTCACGTGCACAGATCGTAGTGAAACCGATTGGACAGCAGTTTGCCAGTGTGGGTGTGATTGCAGGGGCAA
CCATTCTTGGTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGGTTCAGGCGACTCAGCGTATC
AAACAGTTATCTGATCAGCAGGATCTGTCGCGTCGTGGTAATGCACGTCGTCTGGTCATGATTGTCGATGACTCGGTAAC
TGTACGTAAGGTAACGTCACGTCTGTTAGAGCGTCAGGGTTATGATATTGTCACTGCCAAAGATGGTGTCGACGCGATTG
AACAGTTGGAAAATGTCCGTCCAGACCTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGTTTCGAAGTAACTAAC
CTGGTTCGCCATCATGATATTCACCGCAACTTGCCAATTATCATGATCACCTCACGTACTGGGGAGAAGCATCGTGAGCG
TGCCTTCAGTCTGGGTGTAACACACTATATGGGTAAACCGTTCCAGGAAGCGGAGCTGCTTGCCAATGTTCAAGAATTAA
TTGCTGCTCAACAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.719

100

0.62