Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG512_RS26650 Genome accession   NZ_CP109565
Coordinates   5654436..5655560 (-) Length   374 a.a.
NCBI ID   WP_116511422.1    Uniprot ID   A0ABV4SRP8
Organism   Streptomyces sp. NBC_01378     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5649436..5660560
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG512_RS26620 (OG512_26510) - 5649590..5650138 (-) 549 WP_116511432.1 SigE family RNA polymerase sigma factor -
  OG512_RS26625 (OG512_26515) - 5650320..5651216 (-) 897 WP_355685373.1 A/G-specific adenine glycosylase -
  OG512_RS26630 (OG512_26520) - 5651296..5651604 (+) 309 WP_355685375.1 hypothetical protein -
  OG512_RS26635 (OG512_26525) - 5651601..5652213 (+) 613 Protein_5255 response regulator -
  OG512_RS26640 (OG512_26530) - 5652214..5652855 (-) 642 WP_356007851.1 phosphatase PAP2 family protein -
  OG512_RS26645 (OG512_26535) - 5653041..5653841 (+) 801 WP_405782738.1 hypothetical protein -
  OG512_RS26650 (OG512_26540) disA 5654436..5655560 (-) 1125 WP_116511422.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG512_RS26655 (OG512_26545) radA/sms 5655673..5657082 (-) 1410 WP_266561540.1 DNA repair protein RadA Machinery gene
  OG512_RS26660 (OG512_26550) - 5657260..5658294 (-) 1035 WP_405781076.1 IS110 family transposase -
  OG512_RS26665 (OG512_26555) - 5658373..5659827 (+) 1455 WP_405782740.1 IS110 family transposase -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40297.15 Da        Isoelectric Point: 4.9269

>NTDB_id=678935 OG512_RS26650 WP_116511422.1 5654436..5655560(-) (disA) [Streptomyces sp. NBC_01378]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVSFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALFELDALTHAELLELPTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=678935 OG512_RS26650 WP_116511422.1 5654436..5655560(-) (disA) [Streptomyces sp. NBC_01378]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGCAAGTCCGGCGGGAGCTCCGGTGCCGATGGGCTGATGCGCGCCTCACT
GAGCGCGGTCGCGCCCGGTACGGCGCTGCGTGACGGCCTCGAGCGAATCCTCCGCGGCAACACCGGCGGACTCATCGTTC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGTACCGGCGGTTTCATCCTGGACGTCGAGTTCACCGCGACGCGTCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACATCACCAAGATCCTTCGGGCGGGCGTCCAGTTGGTGCC
CGACCCCACGATCCCCACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCAGCTTCCCCG
TGGTCTCGGTGTCGCAGTCGATGCGGCTCATCGCCCTTTACGTGGACGGGCAGCGGCGCGTCCTCGAGGACTCGGCCGCG
ATTCTCTCGCGTGCGAATCAGGCGCTCGCCACTCTTGAGCGGTACAAGCTCCGCTTGGACGAGGTGGCCGGGACGCTCTC
CGCGCTCGAGATCGAGGATCTCGTGACCGTGCGTGATGTGACCGCGGTCGCGCAGCGGCTGGAGATGGTGAGGCGCATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACGGATGGTCGGCTGCTCGCCCTTCAGCTCGACGAGTTGATCGCC
GGGGTGGAGCCCGAGCGGGAGCTCGTCGTTCGGGACTATGTGCCCGAACCTACAGCCAAGCGGTCCCGCACTGTCGACGA
GGCGCTGTTCGAGCTCGACGCCCTGACGCATGCCGAGCTTCTCGAACTGCCCACTGTGGCACGCGCGTTGGGGTACACCG
GGTCTCCGGAGACTCTGGACTCGGCCGTTTCGCCTCGCGGGTTCCGGCTGTTGGCGAAGGTGCCTCGGCTGCCCGGGGCC
ATCATTGACCGGCTTGTCGAGCACTTCGGGGGGCTGCAGAAGCTGCTCGCCGCCAGCGTCGATGATCTGCAGGCCGTGGA
CGGCGTCGGGGAGGCCCGTGCCCGGAGCGTGCGGGAAGGGCTCTCGCGGTTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43