Detailed information NTG0067845

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HC081234_RS10740
• Genome accession: NZ_AP017374
• Coordinates: 2105467..2106252 (-)
• Length: 261 a.a.
• NCBI ID: WP_014667435.1
• Uniprot ID: -
• Organism: Helicobacter cinaedi strain MRY08-1234
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2100467..2111252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HC081234_RS10720 (HC081234_22570)	speA	2100823..2102673 (-)	1851	WP_002955968.1	biosynthetic arginine decarboxylase	-
HC081234_RS10725 (HC081234_22580)	ybeY	2102798..2103463 (+)	666	WP_231997565.1	rRNA maturation RNase YbeY	-
HC081234_RS11245	-	2104124..2104366 (+)	243	WP_133246272.1	hypothetical protein	-
HC081234_RS10730 (HC081234_22600)	-	2104304..2104945 (-)	642	WP_014667434.1	TetR/AcrR family transcriptional regulator	-
HC081234_RS10735 (HC081234_22610)	dprB	2105045..2105467 (-)	423	WP_002955972.1	Holliday junction resolvase RuvX	Machinery gene
HC081234_RS10740 (HC081234_22620)	dprA	2105467..2106252 (-)	786	WP_014667435.1	DNA-processing protein DprA	Machinery gene
HC081234_RS10745 (HC081234_22630)	-	2106289..2107371 (-)	1083	WP_014667624.1	divergent polysaccharide deacetylase family protein	-
HC081234_RS10750 (HC081234_22640)	minE	2107372..2107623 (-)	252	WP_014667625.1	cell division topological specificity factor MinE	-
HC081234_RS10755 (HC081234_22650)	minD	2107620..2108435 (-)	816	WP_014667436.1	septum site-determining protein MinD	-
HC081234_RS10760 (HC081234_22660)	-	2108502..2109053 (-)	552	WP_014667437.1	hypothetical protein	-
HC081234_RS10765 (HC081234_22670)	-	2109053..2109967 (-)	915	WP_014667438.1	type II restriction endonuclease	-
HC081234_RS10770 (HC081234_22680)	-	2109973..2111178 (-)	1206	WP_014667439.1	argininosuccinate synthase	-

Sequence

Protein

• Length: 261 a.a.
• Molecular weight: 29122.00 Da
• Isoelectric Point: 8.7183

>NTDB_id=67845 HC081234_RS10740 WP_014667435.1 2105467..2106252(-) (dprA) [Helicobacter cinaedi strain MRY08-1234]
MKADIQSLESIPLNLKALKNPPKKLFYKGGALDSLLQAQPKIAIVGTRKPNPYTKSFVAKLASNIAKLQGVVVSGGAIGV
DIIAHIHAFPRTIMFSPSSLDIYYPRSNKTMIEKMMQECAVISEYESPYMPHRFSFLERNRLVIALSDVVIIPQADKQSG
SMQSARIACELKKELFVLPHRLGESDGTQELLAKGKAQCIYDINAFLEGIFGVKLQENDEVLAFCMKNPSFEEAYLKFGE
KIYEYELEGKIVRESGSIRVL

Nucleotide

• Length: 786 bp

>NTDB_id=67845 HC081234_RS10740 WP_014667435.1 2105467..2106252(-) (dprA) [Helicobacter cinaedi strain MRY08-1234]
ATGAAAGCAGATATACAATCTTTAGAATCTATCCCTTTAAATCTTAAAGCATTAAAAAATCCACCAAAAAAGCTTTTTTA
TAAGGGTGGGGCATTAGATTCACTGCTTCAAGCACAGCCTAAAATCGCCATTGTCGGCACAAGAAAGCCTAATCCTTACA
CAAAGTCCTTTGTTGCTAAACTCGCTTCAAATATCGCAAAGCTTCAAGGTGTAGTGGTGAGCGGAGGGGCGATTGGTGTG
GATATTATCGCACATATTCACGCTTTTCCACGCACGATAATGTTCTCCCCCTCAAGCCTAGATATTTACTATCCGCGTTC
AAATAAAACAATGATTGAAAAAATGATGCAAGAATGTGCGGTAATAAGCGAGTATGAAAGCCCATATATGCCCCATAGAT
TTAGCTTTTTAGAACGCAATCGGCTTGTGATTGCCCTAAGTGATGTGGTGATTATCCCCCAAGCAGATAAGCAAAGTGGC
TCAATGCAGAGTGCTAGAATCGCCTGTGAGCTTAAAAAAGAGCTTTTTGTCCTGCCTCATCGTTTGGGGGAGAGTGATGG
GACACAAGAGCTTTTAGCCAAGGGCAAGGCACAATGTATTTATGATATAAATGCGTTTTTGGAAGGGATTTTTGGCGTGA
AATTGCAAGAAAATGATGAGGTTTTGGCATTTTGTATGAAGAATCCTAGCTTTGAGGAGGCGTATTTAAAATTTGGTGAA
AAGATTTATGAATACGAGCTTGAAGGCAAAATCGTGCGTGAATCTGGAAGCATACGGGTGCTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (10-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	55	99.617	0.548
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.362	90.038	0.444