Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG741_RS22730 Genome accession   NZ_CP109530
Coordinates   4934575..4935699 (-) Length   374 a.a.
NCBI ID   WP_405600665.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01410     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4929575..4940699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG741_RS22705 (OG741_22675) cseB 4930380..4931087 (-) 708 WP_405600659.1 two-component system response regulator CseB -
  OG741_RS22710 (OG741_22680) - 4931100..4931771 (-) 672 WP_405600661.1 hypothetical protein -
  OG741_RS22715 (OG741_22685) - 4931759..4932331 (-) 573 WP_266481599.1 SigE family RNA polymerase sigma factor -
  OG741_RS22720 (OG741_22690) - 4932584..4933501 (-) 918 WP_405605718.1 A/G-specific adenine glycosylase -
  OG741_RS22725 (OG741_22695) - 4933675..4934484 (+) 810 WP_405600663.1 hypothetical protein -
  OG741_RS22730 (OG741_22700) disA 4934575..4935699 (-) 1125 WP_405600665.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG741_RS22735 (OG741_22705) radA/sms 4935801..4937234 (-) 1434 WP_405600667.1 DNA repair protein RadA Machinery gene
  OG741_RS22740 (OG741_22710) - 4937417..4939144 (+) 1728 WP_405600669.1 BACON domain-containing protein -
  OG741_RS22745 (OG741_22715) - 4939427..4940290 (-) 864 WP_405600670.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40279.07 Da        Isoelectric Point: 4.9451

>NTDB_id=678340 OG741_RS22730 WP_405600665.1 4934575..4935699(-) (disA) [Streptomyces sp. NBC_01410]
MAAKDGAGAPGKSGGGSGNEALIRAALSAVAPGQALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDISKIHRAGVQLVPDASIPTEETGTRHRTADRVSRQCGFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALTELNDLTHTELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=678340 OG741_RS22730 WP_405600665.1 4934575..4935699(-) (disA) [Streptomyces sp. NBC_01410]
GTGGCAGCCAAGGACGGGGCAGGTGCACCCGGAAAGTCCGGCGGAGGCTCCGGCAACGAAGCACTGATCCGCGCCGCCCT
GAGCGCGGTCGCGCCCGGGCAGGCCCTCCGCGACGGGCTCGAGCGGATCCTCCGCGGCAACACCGGAGGCCTGATCGTCC
TCGGCATGGACAAAACGGTCGAATCCATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTGGACGGCGCGCTCATCCTCGACAAGGACATCAGCAAGATCCACCGGGCCGGTGTGCAGCTGGTCCC
GGACGCGTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCGCGCCAGTGCGGCTTCCCCG
TCGTGTCCGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTTGAGGAGTCGGCCGCG
ATCCTCTCCCGCGCGAACCAGGCTCTCGCGACCCTTGAGCGCTACAAACTCCGCCTCGACGAGGTCGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTGACGGCGGTGGCGCAGCGGCTGGAGATGGTGCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGTTGGGCACCGACGGCCGTCTTCTCTCGCTGCAGCTGGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGGGAGCTGGTCGTACGCGACTACGTGCCGGAGCCCACGGCGAAGCGGTCGCGCACGGTGGACGA
GGCGCTTACCGAGCTGAACGACCTCACGCACACCGAGCTGCTCGAACTGCCCATAGTGGCAAGGGCGTTGGGCTACAGCG
GCTCGCCCGAGACGCTCGACTCCGCGGTCTCGCCGCGCGGTTACCGTCTGCTGGCGAAGGTGCCGAGGCTGCCCGGCGCG
ATCATCGAGCGGCTCGTCGAGCACTTCGGCGGCCTGCAGAAGCTGCTGGCGGCGAGCGTCGACGATCTGCAGACGGTCGA
CGGCGTCGGGGAGGCACGGGCACGGAGCGTGCGCGAGGGCCTTTCGCGGCTGGCGGAGTCCTCGATCCTCGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438