Detailed information NTG0678169

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG234_RS10870
• Genome accession: NZ_CP109513
• Coordinates: 2499975..2501273 (-)
• Length: 432 a.a.
• NCBI ID: WP_018103185.1
• Uniprot ID: A0ABY6PWL5
• Organism: Streptomyces sp. NBC_01420
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2494975..2506273

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG234_RS10860 (OG234_10875)	-	2496134..2498755 (-)	2622	WP_329025186.1	valine--tRNA ligase	-
OG234_RS10865 (OG234_10880)	-	2498895..2499896 (+)	1002	WP_405759137.1	hypothetical protein	-
OG234_RS10870 (OG234_10885)	clpX	2499975..2501273 (-)	1299	WP_018103185.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG234_RS10875 (OG234_10890)	clpP	2501430..2502113 (-)	684	WP_018518168.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG234_RS10880 (OG234_10895)	-	2502191..2502796 (-)	606	WP_018518167.1	ATP-dependent Clp protease proteolytic subunit	-
OG234_RS10885 (OG234_10900)	tig	2503063..2504445 (-)	1383	WP_329025190.1	trigger factor	-
OG234_RS10900 (OG234_10915)	-	2504994..2505188 (-)	195	WP_093708837.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47332.15 Da
• Isoelectric Point: 4.8363

>NTDB_id=678169 OG234_RS10870 WP_018103185.1 2499975..2501273(-) (clpX) [Streptomyces sp. NBC_01420]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDEGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=678169 OG234_RS10870 WP_018103185.1 2499975..2501273(-) (clpX) [Streptomyces sp. NBC_01420]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTCCGCTGGGAGGAGCTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGGCGCGGGCCG
CGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGACGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCCCGCGGCCTGC
GCGCGATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTGGTCATCACC
GCCGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGGGCGACGAGGGCCG
CCACGAGAAGTCCGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516