Detailed information NTG0677986

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: L2Y96_RS18440
• Genome accession: NZ_CP095741
• Coordinates: 4095189..4096607 (+)
• Length: 472 a.a.
• NCBI ID: WP_247329120.1
• Uniprot ID: -
• Organism: Luteibacter aegosomaticola strain 335
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4090189..4101607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Y96_RS18425 (L2Y96_18425)	sucD	4091210..4092082 (-)	873	WP_247329115.1	succinate--CoA ligase subunit alpha	-
L2Y96_RS18430 (L2Y96_18430)	sucC	4092096..4093256 (-)	1161	WP_247329118.1	ADP-forming succinate--CoA ligase subunit beta	-
L2Y96_RS18435 (L2Y96_18435)	-	4093499..4095121 (+)	1623	WP_247337123.1	ATP-binding protein	-
L2Y96_RS18440 (L2Y96_18440)	pilR	4095189..4096607 (+)	1419	WP_247329120.1	sigma-54 dependent transcriptional regulator	Regulator
L2Y96_RS18445 (L2Y96_18445)	-	4097195..4098757 (-)	1563	WP_247329122.1	hybrid sensor histidine kinase/response regulator	-
L2Y96_RS18450 (L2Y96_18450)	-	4098776..4099222 (-)	447	WP_247329124.1	response regulator	-
L2Y96_RS18455 (L2Y96_18455)	-	4099219..4101018 (-)	1800	WP_247329126.1	ATP-binding protein	-

Sequence

Protein

• Length: 472 a.a.
• Molecular weight: 51140.77 Da
• Isoelectric Point: 5.7779

>NTDB_id=677986 L2Y96_RS18440 WP_247329120.1 4095189..4096607(+) (pilR) [Luteibacter aegosomaticola strain 335]
MSKQTVLVIDDERDIRELLTITLGRMELDVDAVGSVSEARNALASRRYDLCFTDMRLPDGSGQEIIELISATYPDMPVAM
ITAYGNVDAAVNALKAGAFDFVSKPVDIHLLRRLVKTALRLSEERKGEAAGKSAPGADRLIGESPVMTEVRGKIAKLARN
QAPVYIGGESGVGKELVARLIHELGPRATGTFVPVNCGAIPSELMESEFFGHRKGSFTGAHADKEGLFQAAHGGTLFLDE
VAELPLHMQVKLLRAIQEKAVRPIGGRDEVPVDVRILSATHKNLAALVEQGQFRQDLFYRINVIELRVPPLRERRGDVPR
LADFILRQLATESGGPPGKLQPEALAALEAYQFPGNVRELENILERAMAMCEGDTIEADDLMLPQRVAMPGEAANAAAGV
PLPPSATGTVAGTPAPLNPAADGSLEDYITNIERDTIIKALEESRYNKTATAKKLGITFRALRYKLKKLGID

Nucleotide

• Length: 1419 bp

>NTDB_id=677986 L2Y96_RS18440 WP_247329120.1 4095189..4096607(+) (pilR) [Luteibacter aegosomaticola strain 335]
ATGAGCAAGCAGACTGTCCTGGTCATCGACGACGAACGGGACATCCGTGAGTTGTTGACCATCACGCTGGGTCGAATGGA
GCTCGACGTTGACGCCGTGGGGAGCGTCAGCGAGGCGCGGAACGCCCTGGCATCCCGTCGATACGACCTGTGTTTCACCG
ACATGCGGCTGCCGGATGGCAGTGGCCAGGAGATCATTGAGCTGATCTCGGCCACCTACCCCGACATGCCCGTGGCCATG
ATCACCGCCTACGGCAACGTGGACGCGGCCGTGAACGCCCTTAAAGCGGGCGCGTTCGATTTCGTCTCAAAGCCGGTGGA
TATCCACCTGCTGCGCCGCCTGGTGAAAACGGCCCTGCGCCTTTCCGAAGAGCGCAAGGGCGAAGCCGCTGGCAAGTCCG
CGCCGGGCGCGGATCGCCTGATCGGCGAATCCCCGGTCATGACCGAAGTGCGCGGCAAGATCGCCAAGCTCGCCCGCAAC
CAGGCGCCGGTGTACATCGGCGGCGAATCGGGCGTGGGCAAAGAGCTGGTCGCCCGGCTTATCCACGAACTGGGCCCGCG
CGCCACCGGCACCTTTGTGCCGGTGAACTGCGGCGCCATTCCGTCCGAGCTGATGGAAAGCGAGTTCTTCGGCCACCGCA
AGGGTAGCTTCACCGGCGCCCACGCGGATAAGGAAGGCCTGTTCCAGGCGGCCCACGGCGGCACCCTGTTCCTCGATGAA
GTGGCCGAGCTGCCCCTGCACATGCAGGTGAAGCTGCTGCGCGCCATCCAGGAAAAGGCCGTGCGCCCGATCGGCGGCCG
CGATGAAGTGCCCGTGGACGTGCGCATCCTCTCAGCCACGCACAAGAACCTCGCCGCGCTCGTCGAGCAGGGCCAGTTCC
GCCAGGATCTGTTCTATCGCATCAACGTGATCGAGCTGCGCGTGCCGCCGCTGCGCGAGCGCCGTGGCGACGTACCCCGC
CTGGCCGATTTCATCCTGCGCCAGCTCGCCACCGAATCCGGCGGCCCGCCCGGCAAGCTGCAGCCCGAAGCGCTCGCCGC
CCTCGAGGCATACCAGTTCCCCGGCAACGTGCGCGAACTCGAAAACATCCTCGAACGCGCCATGGCCATGTGCGAAGGCG
ACACCATCGAGGCCGATGACCTTATGTTGCCGCAGCGCGTAGCGATGCCCGGCGAGGCAGCCAATGCTGCCGCTGGCGTA
CCGCTGCCGCCTTCGGCCACCGGTACGGTCGCCGGCACGCCGGCGCCGCTGAACCCGGCCGCCGATGGCTCGCTCGAGGA
TTACATCACCAACATCGAGCGCGACACGATCATCAAAGCCCTGGAAGAGTCACGCTACAACAAGACCGCCACGGCCAAGA
AGCTTGGCATCACGTTCCGCGCGCTGCGCTACAAACTGAAAAAGCTCGGAATCGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (6-115)

• Bacterial regulatory protein, Fis family (HTH_8) (431-469)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	61.441	100	0.614
pilR	Acinetobacter baumannii strain A118	48.291	99.153	0.479