Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG906_RS19280 Genome accession   NZ_CP109500
Coordinates   4337715..4338839 (-) Length   374 a.a.
NCBI ID   WP_053678377.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01426     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4332715..4343839
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG906_RS19250 (OG906_19250) cseB 4332942..4333646 (-) 705 WP_267801312.1 two-component system response regulator CseB -
  OG906_RS19255 (OG906_19255) - 4333660..4334310 (-) 651 WP_329448060.1 hypothetical protein -
  OG906_RS19260 (OG906_19260) - 4334349..4334909 (-) 561 WP_053678383.1 SigE family RNA polymerase sigma factor -
  OG906_RS19265 (OG906_19265) - 4335129..4336046 (-) 918 WP_329444421.1 A/G-specific adenine glycosylase -
  OG906_RS19270 (OG906_19270) - 4336076..4336684 (-) 609 WP_267801314.1 phosphatase PAP2 family protein -
  OG906_RS19275 (OG906_19275) - 4336845..4337654 (+) 810 WP_329444423.1 hypothetical protein -
  OG906_RS19280 (OG906_19280) disA 4337715..4338839 (-) 1125 WP_053678377.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG906_RS19285 (OG906_19285) radA/sms 4339024..4340442 (-) 1419 WP_267801316.1 DNA repair protein RadA Machinery gene
  OG906_RS19290 (OG906_19290) - 4340746..4342494 (+) 1749 WP_329444426.1 hypothetical protein -
  OG906_RS19295 (OG906_19295) - 4342568..4343395 (-) 828 WP_329444428.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40415.38 Da        Isoelectric Point: 5.1189

>NTDB_id=677968 OG906_RS19280 WP_053678377.1 4337715..4338839(-) (disA) [Streptomyces sp. NBC_01426]
MAAKDGAAASGKSGASSRQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKNVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIHTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALPALDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=677968 OG906_RS19280 WP_053678377.1 4337715..4338839(-) (disA) [Streptomyces sp. NBC_01426]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCGGGCGCGAGCTCCAGGCAAGAGGCCATGATGCGTGCCTCACT
GAGCGCGGTCGCACCTGGTCAGCCCCTTCGGGACGGCCTGGAGAGAATCGTCCGGGGCAACACCGGTGGCCTGATCGTTC
TCGGCATGGACAAGAACGTCGAGGCGATGTGCACCGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGTTGCGC
GAGCTGTGCAAGCTCGACGGGGCGCTCATCCTGGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCGTCCATCCACACGGAGGAGACGGGCACCCGCCACCGCACGGCCGACCGCGTCTCCAAGCAGTGCGGGTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGTTGTACGTGGACGGTGAGAGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACGGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTGTCCCTGCAACTGGACGAGCTGACGGTC
GGCATCGAGCAGGAGCGGGAGCTGGTGATCCGGGACTACGTTCCGGAGCCCACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGCCGGCGCTGGACGCGCTCACGCATCCGGAACTGCTGGAGCTGGCGATCGTCGCGAAGGCCCTGGGGTACACGG
GGTCGCCGGAGACGCTGGACTCGGCGGTGTCCCCGCGGGGCTACCGGTTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCCGCGAGTGTGGACGACCTGCAGACGGTGGA
CGGCGTGGGCGAGGCCCGGGCGCGGAGCGTCCGCGAGGGCCTGTCGCGACTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441