Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   L2Y94_RS06245 Genome accession   NZ_CP095740
Coordinates   1355605..1356006 (+) Length   133 a.a.
NCBI ID   WP_283248523.1    Uniprot ID   -
Organism   Luteibacter aegosomatis strain 321     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1350605..1361006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Y94_RS06215 (L2Y94_06215) - 1351083..1352009 (-) 927 WP_247373792.1 aspartate carbamoyltransferase catalytic subunit -
  L2Y94_RS06220 (L2Y94_06220) ruvX 1352044..1352460 (-) 417 WP_247373794.1 Holliday junction resolvase RuvX -
  L2Y94_RS06225 (L2Y94_06225) - 1352465..1353031 (-) 567 WP_144911290.1 YqgE/AlgH family protein -
  L2Y94_RS06230 (L2Y94_06230) - 1353122..1353451 (+) 330 WP_247373796.1 hypothetical protein -
  L2Y94_RS06235 (L2Y94_06235) - 1353575..1354435 (-) 861 WP_247373798.1 energy transducer TonB -
  L2Y94_RS06240 (L2Y94_06240) gshB 1354432..1355373 (-) 942 WP_247373800.1 glutathione synthase -
  L2Y94_RS06245 (L2Y94_06245) pilG 1355605..1356006 (+) 402 WP_283248523.1 twitching motility response regulator PilG Regulator
  L2Y94_RS06250 (L2Y94_06250) - 1356045..1356419 (+) 375 WP_144911281.1 response regulator -
  L2Y94_RS06255 (L2Y94_06255) - 1356427..1356972 (+) 546 WP_247373801.1 chemotaxis protein CheW -
  L2Y94_RS06260 (L2Y94_06260) - 1357106..1359139 (+) 2034 WP_247373802.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14691.02 Da        Isoelectric Point: 8.5009

>NTDB_id=677957 L2Y94_RS06245 WP_283248523.1 1355605..1356006(+) (pilG) [Luteibacter aegosomatis strain 321]
MNDNARGTDLAGLKVMVIDDSKTIRRTAETLLKKEGCDVLTAVDGFEALAKISDQKPNIIFVDIMMPRLDGYQTCALIKN
NAQFRGTPVIMLSSKDGLFDKARGRIVGAEQYLTKPFTRDELLGAIQRFATAH

Nucleotide


Download         Length: 402 bp        

>NTDB_id=677957 L2Y94_RS06245 WP_283248523.1 1355605..1356006(+) (pilG) [Luteibacter aegosomatis strain 321]
GTGAACGACAACGCACGCGGTACCGACCTGGCCGGACTCAAGGTCATGGTCATCGACGATTCGAAAACCATCCGACGCAC
GGCGGAGACCCTGCTGAAGAAGGAAGGCTGCGACGTCCTCACCGCCGTGGACGGGTTCGAGGCGCTGGCGAAAATCTCCG
ACCAGAAGCCCAACATCATCTTCGTGGACATCATGATGCCGCGCCTGGACGGCTACCAGACCTGCGCGCTGATCAAGAAC
AACGCGCAGTTCCGCGGTACGCCGGTGATCATGCTCTCGTCGAAGGACGGCCTGTTCGACAAGGCGCGCGGCCGCATCGT
CGGTGCCGAGCAATACCTCACCAAGCCGTTTACCCGCGACGAACTCCTCGGCGCGATCCAGCGTTTCGCGACGGCCCACT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.901

90.977

0.654
  vicR Streptococcus mutans UA159

42.105

85.714

0.361