Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG207_RS19700 Genome accession   NZ_CP109487
Coordinates   4424024..4425148 (+) Length   374 a.a.
NCBI ID   WP_266603467.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01439     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4419024..4430148
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG207_RS19685 (OG207_19695) - 4419421..4420293 (+) 873 WP_329099794.1 hypothetical protein -
  OG207_RS19690 (OG207_19700) - 4420322..4422097 (-) 1776 WP_329099795.1 hypothetical protein -
  OG207_RS19695 (OG207_19705) radA/sms 4422313..4423725 (+) 1413 WP_329099796.1 DNA repair protein RadA Machinery gene
  OG207_RS19700 (OG207_19710) disA 4424024..4425148 (+) 1125 WP_266603467.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG207_RS19705 (OG207_19715) - 4425295..4426107 (-) 813 WP_329099797.1 hypothetical protein -
  OG207_RS19710 (OG207_19720) - 4426268..4426918 (+) 651 WP_329099798.1 phosphatase PAP2 family protein -
  OG207_RS19715 (OG207_19725) - 4426915..4427892 (+) 978 WP_329099799.1 A/G-specific adenine glycosylase -
  OG207_RS19720 (OG207_19730) - 4428077..4428637 (+) 561 WP_030010715.1 SigE family RNA polymerase sigma factor -
  OG207_RS19725 (OG207_19735) - 4428673..4429305 (+) 633 WP_329107742.1 hypothetical protein -
  OG207_RS19730 (OG207_19740) cseB 4429345..4430058 (+) 714 WP_329099800.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40406.37 Da        Isoelectric Point: 4.9472

>NTDB_id=677571 OG207_RS19700 WP_266603467.1 4424024..4425148(+) (disA) [Streptomyces sp. NBC_01439]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELPIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=677571 OG207_RS19700 WP_266603467.1 4424024..4425148(+) (disA) [Streptomyces sp. NBC_01439]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCGGGTGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGTTGCGCGACGGCTTGGAGCGGATCGTCCGCGGCAACACCGGCGGGCTCATCGTCC
TCGGTATGGACAAGAGCGTCGAGGCGATGTGCACCGGCGGCTTCGTCCTGGACGTGGAGTTCACCGCGACCAGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGAGTGCAGCTGGTGCC
GGACGCGTCGATCCCTACGGAGGAGACGGGCACGCGCCACCGTACGGCCGACCGCGTCTCCAAGCAGTGCGGCTTCCCCG
TGGTGTCGGTGTCGCAGTCGATGCGACTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCACTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTCGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTGTCGCTGCAACTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGTGAGCTCGTCATCCGCGACTACGTGCCGGAACCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCGGAGCTGGACGCGCTGACGCATCCGGAGCTCCTGGAGCTGCCGATCGTGGCGCGGGCACTGGGGTACACGG
GCTCGCCGGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCGGCCAGCGTCGACGACCTGCAGACGGTGGA
CGGGGTGGGCGAGGCCCGTGCGCGGAGCGTCCGCGAGGGCCTGTCCCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444