Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG595_RS24530 Genome accession   NZ_CP109479
Coordinates   5619678..5620802 (-) Length   374 a.a.
NCBI ID   WP_329275438.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01451     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5614678..5625802
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG595_RS24505 (OG595_24490) cseB 5614928..5615635 (-) 708 WP_164412131.1 two-component system response regulator CseB -
  OG595_RS24510 (OG595_24495) - 5615688..5616338 (-) 651 WP_329275427.1 hypothetical protein -
  OG595_RS24515 (OG595_24500) - 5616563..5617105 (-) 543 WP_329275431.1 SigE family RNA polymerase sigma factor -
  OG595_RS24520 (OG595_24505) - 5617403..5618359 (-) 957 WP_329275433.1 A/G-specific adenine glycosylase -
  OG595_RS24525 (OG595_24510) - 5618715..5619575 (+) 861 WP_329275435.1 hypothetical protein -
  OG595_RS24530 (OG595_24515) disA 5619678..5620802 (-) 1125 WP_329275438.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG595_RS24535 (OG595_24520) radA/sms 5620884..5622293 (-) 1410 WP_329275441.1 DNA repair protein RadA Machinery gene
  OG595_RS24540 (OG595_24525) - 5622511..5624307 (+) 1797 WP_329275444.1 hypothetical protein -
  OG595_RS24545 (OG595_24530) - 5624367..5625161 (-) 795 WP_329283157.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39994.73 Da        Isoelectric Point: 4.9130

>NTDB_id=677313 OG595_RS24530 WP_329275438.1 5619678..5620802(-) (disA) [Streptomyces sp. NBC_01451]
MAANDRAAAPGKYGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFSATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPNIPTEETGTRHRTADRVSKQVSYSVISVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVVQRLEMVRLIATEIAGYVLELGTDGRLLALQLEELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDALSHAELLELSTVAKALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=677313 OG595_RS24530 WP_329275438.1 5619678..5620802(-) (disA) [Streptomyces sp. NBC_01451]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTACGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCGCTGCGCGACGGGCTTGAACGGATTCTCCGCGGCAACACCGGCGGACTCATCGTGC
TGGGCTCCGACAAGACCGTCGAGGCGATGTGCACGGGCGGTTTCGTCCTGGACGTCGAGTTCTCGGCGACGCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCGGACCTGTCCAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
CGACCCGAACATCCCCACCGAGGAGACGGGCACCCGGCACCGCACCGCCGACCGCGTGTCGAAGCAGGTGAGCTACTCGG
TCATCTCGGTGTCCCAGTCCATGAGACTCATCGCGCTGTACGTGGACGGCCAGCGCCGTGTCCTGGAGGACTCGGCCGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTCGTGACGGTCCGGGACGTCTCCGCGGTGGTGCAGCGCCTGGAGATGGTCCGTCTCATCG
CGACGGAGATCGCCGGTTACGTGCTCGAACTGGGCACCGACGGGCGGCTTCTGGCCCTCCAGCTGGAGGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTCCGGGACTATGTCCCCGAGCCGACCGCCAAGCGCTCCCGCACCGTCGACGA
GGCGCTCGCCGAACTCGACGCGCTCAGCCACGCCGAGCTGCTCGAACTCTCCACGGTGGCCAAGGCCCTGGGCTACACGG
GCTCACCCGAGACGCTCGACTCGGCGGTCTCCCCCCGCGGCTTCCGCCTCCTGGCGAAGGTGCCGCGCCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAACACTTCGGCGGCCTGCAGAAGCTGCTGGCGGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGAGGGCACGCAGCGTGCGGGAAGGCCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.821

92.513

0.433