Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   MW696_RS10265 Genome accession   NZ_CP095476
Coordinates   1996820..1996960 (-) Length   46 a.a.
NCBI ID   WP_003184860.1    Uniprot ID   P69890
Organism   Bacillus glycinifermentans strain MGMM1     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1991820..2001960
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MW696_RS10240 (MW696_10245) - 1992131..1992523 (-) 393 WP_048406739.1 hotdog fold thioesterase -
  MW696_RS10245 (MW696_10250) comA 1992543..1993181 (-) 639 WP_046131689.1 response regulator transcription factor Regulator
  MW696_RS10250 (MW696_10255) comP 1993264..1995567 (-) 2304 WP_247072933.1 ATP-binding protein Regulator
  MW696_RS10255 (MW696_10260) comX 1995578..1995745 (-) 168 WP_247072943.1 competence pheromone ComX -
  MW696_RS10260 (MW696_10265) - 1995749..1996630 (-) 882 WP_247073236.1 polyprenyl synthetase family protein -
  MW696_RS10265 (MW696_10270) degQ 1996820..1996960 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  MW696_RS10270 (MW696_10275) - 1997452..1997799 (+) 348 WP_247072945.1 hypothetical protein -
  MW696_RS10275 (MW696_10280) - 1997850..1999067 (-) 1218 WP_048406737.1 HDOD domain-containing protein -
  MW696_RS10280 (MW696_10285) - 1999222..2000631 (-) 1410 WP_247073237.1 nicotinate phosphoribosyltransferase -
  MW696_RS10285 (MW696_10290) - 2000709..2001260 (-) 552 WP_247072947.1 isochorismatase family cysteine hydrolase -
  MW696_RS10290 (MW696_10295) - 2001398..2001790 (-) 393 WP_247072949.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5747.56 Da        Isoelectric Point: 8.4596

>NTDB_id=677159 MW696_RS10265 WP_003184860.1 1996820..1996960(-) (degQ) [Bacillus glycinifermentans strain MGMM1]
MEKQQIEELKQLLWRLENEIRETKDSLRKINKSIDQYDKYTYLKTS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=677159 MW696_RS10265 WP_003184860.1 1996820..1996960(-) (degQ) [Bacillus glycinifermentans strain MGMM1]
GTGGAAAAGCAACAAATTGAAGAGTTAAAGCAATTGCTTTGGCGGCTTGAAAATGAAATCAGGGAAACGAAAGACTCCTT
GCGCAAGATTAACAAAAGTATCGACCAATACGATAAATACACATATTTAAAAACCTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P69890

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

71.429

91.304

0.652