Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MW696_RS10245 Genome accession   NZ_CP095476
Coordinates   1992543..1993181 (-) Length   212 a.a.
NCBI ID   WP_046131689.1    Uniprot ID   -
Organism   Bacillus glycinifermentans strain MGMM1     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1987543..1998181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MW696_RS10210 (MW696_10215) - 1988723..1989154 (+) 432 WP_048353787.1 Na(+)/H(+) antiporter subunit B -
  MW696_RS10215 (MW696_10220) - 1989154..1989495 (+) 342 WP_046131683.1 Na(+)/H(+) antiporter subunit C -
  MW696_RS10220 (MW696_10225) - 1989488..1990966 (+) 1479 WP_247072929.1 Na+/H+ antiporter subunit D -
  MW696_RS10225 (MW696_10230) - 1990972..1991448 (+) 477 WP_048353785.1 Na+/H+ antiporter subunit E -
  MW696_RS10230 (MW696_10235) - 1991448..1991732 (+) 285 WP_048353784.1 Na(+)/H(+) antiporter subunit F1 -
  MW696_RS10235 (MW696_10240) mnhG 1991716..1992090 (+) 375 WP_048353783.1 monovalent cation/H(+) antiporter subunit G -
  MW696_RS10240 (MW696_10245) - 1992131..1992523 (-) 393 WP_048406739.1 hotdog fold thioesterase -
  MW696_RS10245 (MW696_10250) comA 1992543..1993181 (-) 639 WP_046131689.1 response regulator transcription factor Regulator
  MW696_RS10250 (MW696_10255) comP 1993264..1995567 (-) 2304 WP_247072933.1 ATP-binding protein Regulator
  MW696_RS10255 (MW696_10260) comX 1995578..1995745 (-) 168 WP_247072943.1 competence pheromone ComX -
  MW696_RS10260 (MW696_10265) - 1995749..1996630 (-) 882 WP_247073236.1 polyprenyl synthetase family protein -
  MW696_RS10265 (MW696_10270) degQ 1996820..1996960 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  MW696_RS10270 (MW696_10275) - 1997452..1997799 (+) 348 WP_247072945.1 hypothetical protein -

Sequence

Protein


Download         Length: 212 a.a.        Molecular weight: 24140.51 Da        Isoelectric Point: 4.6583

>NTDB_id=677157 MW696_RS10245 WP_046131689.1 1992543..1993181(-) (comA) [Bacillus glycinifermentans strain MGMM1]
MRRLLVIDDHPAVMEGTKAILETNQDFLVDCLSPEASEQFLTKHDFSAYDLILMDLNLGEINGMDLSKKILETCSSCKII
VYTGYEVEDYFEEAIRSGMHGAISKTESKEKIIEYIYQVLDNKIVVDYDYLKDLITKQKTKSSSQETQHDVLTERERLIL
KEVEKGYTNQEIADALHLSKRSIEYSLTSVFNKLNVGSRTEAVLIAKSEGVL

Nucleotide


Download         Length: 639 bp        

>NTDB_id=677157 MW696_RS10245 WP_046131689.1 1992543..1993181(-) (comA) [Bacillus glycinifermentans strain MGMM1]
ATGAGAAGATTACTTGTGATCGATGATCATCCGGCTGTCATGGAGGGGACAAAGGCAATTCTTGAAACGAATCAGGATTT
TCTTGTCGATTGCCTCAGCCCTGAAGCCAGCGAACAATTTCTGACTAAACATGATTTTTCTGCGTATGACCTGATCTTAA
TGGATTTGAATCTGGGCGAAATCAACGGAATGGACCTCTCCAAGAAAATCCTTGAGACCTGTTCATCATGCAAAATTATC
GTTTATACCGGATACGAAGTAGAGGATTATTTTGAAGAAGCGATTCGTTCCGGTATGCATGGTGCGATCAGCAAAACAGA
GTCAAAGGAAAAGATTATTGAGTACATATATCAAGTGTTGGATAATAAAATCGTCGTCGATTATGATTACTTAAAAGATC
TGATCACTAAGCAAAAAACAAAATCAAGCAGCCAAGAGACCCAGCACGACGTATTGACCGAAAGAGAACGCTTGATCTTA
AAAGAGGTCGAAAAAGGCTATACGAATCAGGAGATTGCCGATGCGCTGCATCTGAGCAAACGTTCGATCGAATACAGCCT
GACTTCCGTATTTAACAAACTGAATGTCGGCTCACGGACGGAAGCTGTATTGATCGCAAAATCCGAAGGCGTACTTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(150-206)

Response regulator receiver domain (Response_reg)

(5-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

75.701

100

0.764