Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MW696_RS05870 Genome accession   NZ_CP095476
Coordinates   1188277..1189077 (-) Length   266 a.a.
NCBI ID   WP_048353339.1    Uniprot ID   -
Organism   Bacillus glycinifermentans strain MGMM1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1183277..1194077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MW696_RS05845 (MW696_05845) - 1184640..1184894 (+) 255 WP_247072441.1 DUF2627 domain-containing protein -
  MW696_RS05850 (MW696_05850) - 1184925..1185653 (-) 729 WP_247072442.1 glycerophosphodiester phosphodiesterase -
  MW696_RS05855 (MW696_05855) - 1185980..1186894 (+) 915 WP_247072443.1 class I SAM-dependent methyltransferase -
  MW696_RS05860 (MW696_05860) - 1187035..1187493 (+) 459 WP_156183661.1 hypothetical protein -
  MW696_RS05865 (MW696_05865) - 1187645..1187947 (-) 303 WP_247072444.1 LCI fold-containing protein -
  MW696_RS05870 (MW696_05870) spo0A 1188277..1189077 (-) 801 WP_048353339.1 sporulation transcription factor Spo0A Regulator
  MW696_RS05875 (MW696_05875) spoIVB 1189367..1190683 (-) 1317 WP_048353350.1 SpoIVB peptidase -
  MW696_RS05880 (MW696_05880) recN 1190855..1192585 (-) 1731 WP_247072445.1 DNA repair protein RecN Machinery gene
  MW696_RS05885 (MW696_05885) argR 1192616..1193065 (-) 450 WP_046131874.1 transcriptional regulator ArgR -
  MW696_RS05890 (MW696_05890) - 1193172..1194017 (-) 846 WP_247072446.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29584.14 Da        Isoelectric Point: 6.6109

>NTDB_id=677138 MW696_RS05870 WP_048353339.1 1188277..1189077(-) (spo0A) [Bacillus glycinifermentans strain MGMM1]
MEKIKVCVADDNRELVGLLSEYIEGQNDMEVIGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQMTHRAPSVQSSVLRPQPESPKKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=677138 MW696_RS05870 WP_048353339.1 1188277..1189077(-) (spo0A) [Bacillus glycinifermentans strain MGMM1]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGTGAATATATCGAGGGTCAAAA
CGACATGGAAGTGATCGGCGTGGCATATAACGGACAGGAATGTCTTTCTCTGTTTAAAGACAAGGAGCCTGACGTACTCG
TACTGGACATTATCATGCCTCATCTCGACGGATTGGCCGTTTTGGAAAGGCTGCGGGAATCTCAGCTTAAAAAACAGCCG
AACGTCATCATGCTGACTGCTTTCGGTCAGGAAGACGTAACGAAAAAAGCCGTGGATTTAGGCGCATCGTACTTCATTCT
GAAGCCGTTTGATATGGAGAATCTCGTCGGCCATATCCGCCAAGTCAGCGGAAACGGTTCTCAAATGACACACCGCGCCC
CTTCGGTTCAAAGCAGCGTCCTTCGGCCGCAGCCTGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGAGCATCATC
CACGAAATCGGCGTTCCCGCCCATATTAAAGGGTACTTATACTTAAGAGAAGCCATCTCCATGGTGTATAACGATATTGA
ACTGCTCGGCAGCATTACGAAAGTGCTGTATCCGGACATCGCCAAAAAATTCAACACGACCGCAAGCCGGGTCGAACGGG
CGATCCGCCATGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGATTCCATCTCTTCTCTGTTCGGCTACACCGTCAGC
ATGTCAAAAGCAAAGCCGACGAACAGCGAGTTCATCGCGATGGTCGCAGATAAGCTGAGGTTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.884

100

0.932