Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   MU520_RS00085 Genome accession   NZ_CP095463
Coordinates   18235..18999 (-) Length   254 a.a.
NCBI ID   WP_012775418.1    Uniprot ID   A0A0Z9LUD5
Organism   Streptococcus suis strain TJS56     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 13235..23999
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MU520_RS00060 - 13720..14079 (-) 360 WP_012774878.1 helix-turn-helix transcriptional regulator -
  MU520_RS00065 - 14183..14386 (-) 204 WP_011922523.1 DUF951 family protein -
  MU520_RS00070 - 14396..15277 (-) 882 WP_011921629.1 diacylglycerol kinase family protein -
  MU520_RS00075 dnaN 15369..16505 (-) 1137 WP_004194538.1 DNA polymerase III subunit beta -
  MU520_RS00080 dnaA 16659..18032 (-) 1374 WP_011921628.1 chromosomal replication initiator protein DnaA -
  MU520_RS00085 spo0J 18235..18999 (-) 765 WP_012775418.1 ParB/RepB/Spo0J family partition protein Regulator
  MU520_RS00090 htrA 19060..20256 (-) 1197 WP_012028059.1 trypsin-like peptidase domain-containing protein Regulator
  MU520_RS00095 rlmH 20430..20909 (+) 480 WP_012028058.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  MU520_RS00100 - 20934..21617 (+) 684 WP_012775416.1 YoaK family protein -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 28966.25 Da        Isoelectric Point: 9.4760

>NTDB_id=676985 MU520_RS00085 WP_012775418.1 18235..18999(-) (spo0J) [Streptococcus suis strain TJS56]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=676985 MU520_RS00085 WP_012775418.1 18235..18999(-) (spo0J) [Streptococcus suis strain TJS56]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCTATTAAGGAAAATGGCTTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAAGAA
CTGACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTGCAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACACATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGAAAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAGGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAGCTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-193)

ParB/Sulfiredoxin domain (ParB_N)

(7-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Z9LUD5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547