Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG707_RS16985 Genome accession   NZ_CP109467
Coordinates   3602645..3603772 (+) Length   375 a.a.
NCBI ID   WP_329119070.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01465     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3597645..3608772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG707_RS16970 (OG707_16975) - 3598595..3599398 (+) 804 WP_329119064.1 hypothetical protein -
  OG707_RS16975 (OG707_16980) - 3599395..3601038 (-) 1644 WP_329119066.1 hypothetical protein -
  OG707_RS16980 (OG707_16985) radA/sms 3601188..3602600 (+) 1413 WP_329119068.1 DNA repair protein RadA Machinery gene
  OG707_RS16985 (OG707_16990) disA 3602645..3603772 (+) 1128 WP_329119070.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG707_RS16990 (OG707_16995) - 3603831..3604643 (-) 813 WP_329119072.1 hypothetical protein -
  OG707_RS16995 (OG707_17000) - 3604808..3605437 (+) 630 WP_329119074.1 phosphatase PAP2 family protein -
  OG707_RS17000 (OG707_17005) - 3605454..3606383 (+) 930 WP_329119076.1 A/G-specific adenine glycosylase -
  OG707_RS17005 (OG707_17010) - 3606525..3607094 (+) 570 WP_329119078.1 SigE family RNA polymerase sigma factor -
  OG707_RS17010 (OG707_17015) - 3607082..3607747 (+) 666 WP_329119080.1 hypothetical protein -
  OG707_RS17015 (OG707_17020) cseB 3607763..3608464 (+) 702 WP_329119082.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 375 a.a.        Molecular weight: 40344.26 Da        Isoelectric Point: 5.0230

>NTDB_id=676878 OG707_RS16985 WP_329119070.1 3602645..3603772(+) (disA) [Streptomyces sp. NBC_01465]
MAANDRAAASGKSGGGSSRTEALMRASLSAVAPGMGLRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRL
RELCKLDGALIVDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESA
AILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELI
AGVEPERELVVHDYVPEPTAKRSRTVPEALAELDTLGHGELLELPLVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPG
AIIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1128 bp        

>NTDB_id=676878 OG707_RS16985 WP_329119070.1 3602645..3603772(+) (disA) [Streptomyces sp. NBC_01465]
GTGGCAGCCAACGACCGGGCAGCAGCGTCCGGAAAGTCCGGCGGGGGCTCCTCCCGTACCGAAGCGCTGATGCGCGCCTC
GCTGAGCGCCGTCGCGCCCGGAATGGGACTGCGCGACGGGCTGGAGCGCATCCTCCGCGGCAACACCGGCGGGCTGATCG
TCCTCGGCATGGACAAGACGGTCGAGTCGATGTGCACCGGCGGCTTCGTACTGGACGTGGAGTTCACCGCGACGCGCCTG
CGCGAGCTGTGCAAGCTCGACGGCGCGCTCATCGTCGACAAGGACATCACCAAGATTCTCCGGGCCGGCGTGCAGCTGGT
CCCGGACGCCTCCATTCCCACGGAGGAGACGGGGACCAGGCACCGGACCGCGGACCGGGTCTCCAAGCAGTGCGGGTTCC
CTGTCGTGTCCGTATCGCAGTCGATGCGCCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTCGAGGAGTCGGCG
GCGATCCTGTCGCGGGCGAACCAGGCCCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGGACGCT
CTCCGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCACGGCGGTCGCTCAGCGCCTGGAGATGGTGCGGCGCA
TCGCGACGGAGATCGCCGAGTACGTGGTGGAGCTGGGGACGGACGGCCGTCTTCTGTCGCTGCAGCTCGACGAGTTGATC
GCGGGTGTGGAGCCGGAGCGGGAGCTCGTGGTCCACGACTACGTACCGGAGCCGACGGCCAAGCGGTCGCGGACGGTGCC
CGAGGCGCTGGCCGAGCTGGACACGCTCGGCCACGGCGAACTGCTCGAACTGCCGCTCGTGGCGCGGGCGCTGGGGTACA
GCGGCTCCCCCGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGGTACCGGCTCCTCGCGAAGGTGCCGCGGCTGCCCGGG
GCGATCATCGAGCGGCTCGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTGGCCGCGAGCGTCGACGATCTGCAGACCGT
GGACGGGGTCGGCGAGGCGCGGGCGCGGAGTGTGCGCGAGGGGCTTTCGCGGCTTGCGGAGTCGTCGATCCTCGAGCGTT
ACGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.225

94.933

0.429