Detailed information NTG0676777

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: MWH18_RS19165
• Genome accession: NZ_CP095407
• Coordinates: 3892271..3893131 (+)
• Length: 286 a.a.
• NCBI ID: WP_032070754.1
• Uniprot ID: A0AAE9M8Y4
• Organism: Acinetobacter pittii strain TCM
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3887271..3898131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWH18_RS19145 (MWH18_19140)	secG	3887878..3888207 (-)	330	WP_002115012.1	preprotein translocase subunit SecG	-
MWH18_RS19150 (MWH18_19145)	tpiA	3888220..3889014 (-)	795	WP_032063691.1	triose-phosphate isomerase	-
MWH18_RS19155 (MWH18_19150)	pilB	3889306..3891018 (+)	1713	WP_032070753.1	type IV-A pilus assembly ATPase PilB	Machinery gene
MWH18_RS19160 (MWH18_19155)	pilC	3891045..3892271 (+)	1227	WP_126117775.1	type II secretion system F family protein	Machinery gene
MWH18_RS19165 (MWH18_19160)	pilD	3892271..3893131 (+)	861	WP_032070754.1	A24 family peptidase	Machinery gene
MWH18_RS19170 (MWH18_19165)	coaE	3893133..3893729 (+)	597	WP_032070755.1	dephospho-CoA kinase	-
MWH18_RS19175 (MWH18_19170)	-	3893726..3894640 (-)	915	WP_032070756.1	DMT family transporter	-
MWH18_RS19180 (MWH18_19175)	rlmB	3894676..3895425 (-)	750	WP_005079348.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
MWH18_RS19185 (MWH18_19180)	-	3895528..3895854 (-)	327	WP_002115102.1	pyrimidine/purine nucleoside phosphorylase	-
MWH18_RS19190 (MWH18_19185)	-	3895931..3897241 (-)	1311	WP_032063688.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32128.61 Da
• Isoelectric Point: 6.4261

>NTDB_id=676777 MWH18_RS19165 WP_032070754.1 3892271..3893131(+) (pilD) [Acinetobacter pittii strain TCM]
MQEIIAYFIQNLTALYIAVALLSLCIGSFLNVVIYRTPKMMEQDWQQECQILLNPELPIIEHEKLTLSKPASSCPACQQP
IRWYQNIPVISWLMLRGKCGDCQHPISIRYPAIELLTMLCSLVVVMVFGPTLQMLWGLVLTWILIALTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=676777 MWH18_RS19165 WP_032070754.1 3892271..3893131(+) (pilD) [Acinetobacter pittii strain TCM]
ATGCAAGAAATTATTGCTTATTTTATTCAAAACTTAACTGCACTTTATATTGCAGTCGCACTATTGAGCCTATGTATTGG
TAGCTTTTTGAATGTGGTAATTTATCGCACCCCCAAAATGATGGAACAAGATTGGCAGCAGGAATGTCAAATATTGCTTA
ATCCCGAACTACCCATCATTGAGCATGAAAAGCTGACATTAAGTAAACCTGCTTCATCATGTCCTGCATGTCAGCAACCG
ATCCGTTGGTATCAAAATATTCCAGTTATAAGCTGGTTAATGTTAAGAGGAAAATGTGGCGATTGCCAACATCCTATTAG
CATTCGTTATCCAGCGATTGAATTACTCACGATGCTATGTTCATTAGTAGTCGTCATGGTTTTTGGTCCAACCCTACAAA
TGCTTTGGGGGCTAGTGCTCACTTGGATTTTGATTGCTTTAACATTTATAGACTTTGATACTCAGCTACTACCTGACCGT
TTCACCCTACCTTTGGCTGCTCTCGGCTTAGGTATTAATACCTTTAATATTTACACCTCGCCTAACTCAGCTATTTGGGG
ATATTTAATCGGTTTTTTATGCCTTTGGATTGTGTATTACTTATTTAAAGTGATTACAGGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTGCTTGCCGCATTAGGCGCGTGGATGGGGCCATTGATGCTGCCATTAATTGTGCTATTGTCATCTTTA
CTAGGTGCAATTATTGGCATCATTTTACTAAAATTACGTAATGATAATCAGCCCTTTGCGTTTGGGCCATATATTGCCAT
TGCGGGTTGGGTTGCCTTTTTATGGGGTGACCAAATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (138-247)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-128)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter baumannii D1279779	95.804	100	0.958
pilD	Acinetobacter nosocomialis M2	95.455	100	0.955
pilD	Vibrio campbellii strain DS40M4	53.309	95.105	0.507
pilD	Vibrio cholerae strain A1552	53.309	95.105	0.507
pilD	Neisseria gonorrhoeae MS11	47.71	91.608	0.437