Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilX   Type   Machinery gene
Locus tag   MWH18_RS01780 Genome accession   NZ_CP095407
Coordinates   368963..369772 (+) Length   269 a.a.
NCBI ID   WP_005067126.1    Uniprot ID   A0A009NM66
Organism   Acinetobacter pittii strain TCM     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 363963..374772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MWH18_RS01745 (MWH18_01745) - 364521..364676 (-) 156 Protein_334 hypothetical protein -
  MWH18_RS01750 (MWH18_01750) rpoZ 364715..364993 (-) 279 WP_002116990.1 DNA-directed RNA polymerase subunit omega -
  MWH18_RS01755 (MWH18_01755) gmk 365066..365695 (-) 630 WP_005804544.1 guanylate kinase -
  MWH18_RS01760 (MWH18_01760) ispH 365818..366768 (+) 951 WP_002116992.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  MWH18_RS01765 (MWH18_01765) fimU 366938..367411 (+) 474 WP_032057265.1 GspH/FimT family pseudopilin Machinery gene
  MWH18_RS01770 (MWH18_01770) pilV 367405..367965 (+) 561 WP_080777128.1 type IV pilus modification protein PilV Machinery gene
  MWH18_RS01775 (MWH18_01775) pilW 367965..368966 (+) 1002 WP_032057268.1 PilW family protein Machinery gene
  MWH18_RS01780 (MWH18_01780) pilX 368963..369772 (+) 810 WP_005067126.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  MWH18_RS01785 (MWH18_01785) pilY1 369784..373638 (+) 3855 WP_032057269.1 PilC/PilY family type IV pilus protein Machinery gene
  MWH18_RS01790 (MWH18_01790) pilY2 373649..374131 (+) 483 WP_002116770.1 type IV pilin protein Machinery gene
  MWH18_RS01795 (MWH18_01795) pilE 374128..374553 (+) 426 WP_002117055.1 type IV pilin protein Machinery gene

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 28531.35 Da        Isoelectric Point: 7.7238

>NTDB_id=676749 MWH18_RS01780 WP_005067126.1 368963..369772(+) (pilX) [Acinetobacter pittii strain TCM]
MTHLIHKSRSKEKGATLIVVLIILLIVISVGVLAIRVAIVSLKVATNSQVSQLNFQSSDTPLELIVQMNPTTLTNITNVI
GAALKEHESNPGAEYNFCYKPVSTATNFAQTRGASLLRAGSANNAVVEDGGVAGFCNLTTDYGSNRQAVVTQVAVSVPTD
AASDIPGSNLPRGTNTSEGTQLPKSMLSTQRIRVITTAFLPAYASTSIETLQRDCLSTSSAKISDNFDTALTAKQTLAEC
LANHNVPFSTQVQEFNYTNKLTQITAPGS

Nucleotide


Download         Length: 810 bp        

>NTDB_id=676749 MWH18_RS01780 WP_005067126.1 368963..369772(+) (pilX) [Acinetobacter pittii strain TCM]
ATGACCCATTTAATTCATAAAAGTCGATCTAAAGAAAAAGGGGCAACCCTTATTGTTGTACTTATTATTTTATTAATTGT
TATTTCTGTAGGTGTTTTAGCAATAAGAGTGGCTATTGTTTCTTTAAAAGTTGCTACCAATAGCCAAGTGAGCCAATTAA
ATTTTCAGTCATCTGACACACCTTTAGAACTCATTGTGCAGATGAATCCTACCACCCTAACTAATATTACCAATGTGATT
GGCGCCGCGCTCAAAGAGCATGAAAGTAACCCAGGCGCAGAATACAACTTTTGTTATAAGCCTGTTTCTACAGCAACAAA
TTTTGCTCAAACCAGAGGTGCAAGTTTACTTCGAGCAGGAAGTGCCAATAATGCGGTTGTCGAAGATGGCGGAGTGGCGG
GTTTCTGCAATTTAACAACTGACTATGGAAGTAATCGTCAAGCAGTGGTTACCCAAGTTGCTGTAAGTGTTCCAACAGAT
GCTGCTAGCGATATCCCAGGTTCAAATTTACCACGAGGAACAAACACCTCGGAAGGTACGCAACTTCCTAAAAGCATGTT
GTCTACGCAACGTATTCGAGTGATCACAACTGCGTTTTTGCCAGCCTATGCTTCTACCTCTATTGAAACTTTACAAAGAG
ATTGCTTAAGCACGAGTTCGGCAAAAATTAGCGACAATTTTGATACCGCATTAACGGCTAAACAAACATTGGCGGAATGT
TTGGCAAATCATAACGTGCCTTTTAGTACTCAAGTTCAAGAATTTAACTATACCAATAAACTCACTCAAATTACGGCACC
AGGTTCATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009NM66

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilX Acinetobacter baumannii D1279779

89.706

100

0.907