Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG285_RS14340 Genome accession   NZ_CP109450
Coordinates   3287913..3289037 (+) Length   374 a.a.
NCBI ID   WP_356835589.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01471     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3282913..3294037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG285_RS14325 (OG285_14310) - 3283548..3284348 (+) 801 WP_371791148.1 hypothetical protein -
  OG285_RS14330 (OG285_14315) - 3284556..3286274 (-) 1719 WP_371791149.1 hypothetical protein -
  OG285_RS14335 (OG285_14320) radA/sms 3286459..3287856 (+) 1398 WP_356835591.1 DNA repair protein RadA Machinery gene
  OG285_RS14340 (OG285_14325) disA 3287913..3289037 (+) 1125 WP_356835589.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG285_RS14345 (OG285_14330) - 3289167..3290006 (-) 840 WP_371793530.1 hypothetical protein -
  OG285_RS14350 (OG285_14335) - 3290190..3290798 (+) 609 WP_356835585.1 phosphatase PAP2 family protein -
  OG285_RS14355 (OG285_14340) - 3290815..3291804 (+) 990 WP_356835583.1 A/G-specific adenine glycosylase -
  OG285_RS14360 (OG285_14345) - 3291991..3292542 (+) 552 WP_266854649.1 SigE family RNA polymerase sigma factor -
  OG285_RS14365 (OG285_14350) - 3292530..3293285 (+) 756 WP_356835581.1 hypothetical protein -
  OG285_RS14370 (OG285_14355) cseB 3293298..3293996 (+) 699 WP_356835579.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40256.15 Da        Isoelectric Point: 5.0132

>NTDB_id=676671 OG285_RS14340 WP_356835589.1 3287913..3289037(+) (disA) [Streptomyces sp. NBC_01471]
MAANDRAAPGRSGGSSSGNEALMRATLSAVAPGTALRDGLERILRGNTGGLIVLGMDKSVEAMCTGGFVMDVEFAATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVTEALVDLNTLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=676671 OG285_RS14340 WP_356835589.1 3287913..3289037(+) (disA) [Streptomyces sp. NBC_01471]
GTGGCAGCCAATGACCGAGCAGCACCCGGGAGATCCGGCGGGAGCTCGTCCGGCAATGAAGCGCTGATGCGTGCCACGCT
GAGCGCCGTCGCGCCCGGTACCGCGCTGCGCGACGGCCTGGAGCGGATCCTCCGCGGGAACACCGGCGGCCTGATCGTCC
TGGGCATGGACAAGAGCGTCGAAGCGATGTGCACCGGCGGTTTCGTCATGGACGTCGAGTTCGCCGCGACCCGCCTGCGG
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGATCTGACCAAGATTCTCCGGGCGGGTGTCCAGCTCGTCCC
GGACGCGTCGATCCCGACCGAGGAGACCGGCACCCGTCACCGCACGGCGGACCGGGTGTCCAAGCAGTGCGGCTTCCCCG
TCGTCTCCGTATCCCAGTCGATGCACCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCCACGCTGGAGCGGTACAAGCTCCGTCTGGACGAGGTCGCGGGCACGCTCTC
CGCACTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTCGCGCAGCGCCTGGAGATGGTCCGGCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTGGACGAGCTGATCGCG
GGCGTCGAGCCGGAGCGGGAGCTGGTGGTCAGGGACTACGTCCCGGAGCCGACGGCGAAACGTTCGCGTACGGTCACCGA
GGCGCTGGTCGACCTGAACACGCTCAGCCACACGGAGCTGCTCGAACTGCCCGTGGTGGCAAGGGCGCTGGGATACAGCG
GCTCTCCGGAGACGCTCGACTCGGCGGTGTCGCCGCGCGGGTTCCGGCTGCTGGCCAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGAGCGGCTGGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGATCTGCAGGCGGTGGA
CGGGGTCGGCGAGGCGCGGGCGCGGAGCGTCCGGGAAGGGCTTTCGCGGCTCGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.763

94.652

0.433