Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   MU540_RS03760 Genome accession   NZ_CP095385
Coordinates   731506..732777 (+) Length   423 a.a.
NCBI ID   WP_046026147.1    Uniprot ID   -
Organism   Limosilactobacillus fermentum strain VHProbi O48     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 726506..737777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MU540_RS03730 (MU540_03700) rpsB 726665..727444 (+) 780 WP_003681957.1 30S ribosomal protein S2 -
  MU540_RS03735 (MU540_03705) tsf 727535..728413 (+) 879 WP_003681955.1 translation elongation factor Ts -
  MU540_RS03740 (MU540_03710) pyrH 728494..729219 (+) 726 WP_003685221.1 UMP kinase -
  MU540_RS03745 (MU540_03715) frr 729219..729779 (+) 561 WP_003685219.1 ribosome recycling factor -
  MU540_RS03750 (MU540_03720) - 729906..730679 (+) 774 WP_102313648.1 isoprenyl transferase -
  MU540_RS03755 (MU540_03725) - 730696..731484 (+) 789 WP_003681950.1 phosphatidate cytidylyltransferase -
  MU540_RS03760 (MU540_03730) eeP 731506..732777 (+) 1272 WP_046026147.1 RIP metalloprotease RseP Regulator
  MU540_RS03765 (MU540_03735) - 732811..734532 (+) 1722 WP_003685216.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 45983.44 Da        Isoelectric Point: 6.8570

>NTDB_id=676656 MU540_RS03760 WP_046026147.1 731506..732777(+) (eeP) [Limosilactobacillus fermentum strain VHProbi O48]
MIITIITFIIVFGILVLVHEFGHYYFAKRAGILVREFSIGMGPKVWWRRSNGTTYTIRILPLGGYVRLAGADEDEDELRP
GTPVTLQTNEEGKVTLINASEKETLLEGIPLRIVASDLEDKLIISGYENDDEETVKTYPVDHDATIVERDGTVVRIAPKD
VQFQSASLPARMMTNFAGPMNNFILSLLVFIILGFTLSGIPTNSNVLGGVTKNSVAAKAGLVSGDKITGVATTKVSTWND
ISQAISPNPGKKLAVTYQRDGKTYHTTVTPKAAKQGSQTVGMIGIREEEKFDPVARINYGWRQFITAGTLIFAVLGHMIT
HGFSLNDLGGPVAIYAGTSQATSLGINGILAFLAMLSINLGIVNLIPIPALDGGKLLLNIVEGIIRRPIPEKVEGILNLA
GFALLMILMVLVTYNDIQRYFIH

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=676656 MU540_RS03760 WP_046026147.1 731506..732777(+) (eeP) [Limosilactobacillus fermentum strain VHProbi O48]
TTGATCATCACCATCATTACTTTTATCATCGTCTTCGGAATCCTGGTGCTCGTTCACGAATTCGGCCACTACTACTTTGC
CAAGCGGGCCGGGATTTTAGTACGCGAGTTTTCGATTGGGATGGGGCCCAAGGTTTGGTGGCGGCGTTCAAACGGGACGA
CCTACACCATCCGGATCCTGCCGCTTGGGGGCTACGTCCGCCTGGCCGGGGCCGATGAAGATGAAGACGAACTCCGTCCC
GGGACGCCGGTGACCTTGCAAACCAATGAGGAAGGCAAGGTGACCCTGATTAACGCCAGCGAAAAGGAAACCCTGTTGGA
GGGGATTCCGCTGCGGATCGTTGCCAGCGACCTGGAGGATAAGTTAATCATCTCCGGGTACGAAAATGATGATGAAGAAA
CCGTCAAGACCTACCCGGTTGATCACGACGCGACGATCGTCGAACGGGACGGGACCGTGGTGCGGATCGCCCCCAAGGAC
GTTCAGTTCCAATCGGCCAGCTTACCGGCGCGGATGATGACCAACTTTGCCGGGCCAATGAACAACTTCATCTTGTCCCT
GCTGGTCTTCATCATCCTGGGCTTTACCCTGAGCGGGATCCCCACCAACTCCAACGTTTTGGGCGGGGTGACCAAGAATT
CGGTGGCTGCCAAGGCCGGCCTGGTGAGCGGCGATAAAATTACCGGGGTGGCGACGACCAAGGTCAGCACCTGGAACGAT
ATTTCCCAGGCAATTTCCCCTAACCCGGGGAAGAAGCTCGCCGTTACCTACCAGCGCGATGGCAAGACCTACCACACCAC
CGTGACGCCTAAGGCCGCCAAACAGGGGAGCCAAACGGTCGGGATGATCGGGATCAGAGAAGAGGAGAAGTTTGATCCGG
TCGCCCGCATTAACTACGGCTGGCGCCAATTTATCACCGCCGGCACCTTGATCTTTGCGGTGCTCGGCCACATGATTACG
CACGGCTTTAGCTTAAACGACCTGGGGGGGCCGGTGGCAATTTACGCTGGCACCTCGCAGGCCACCTCGTTAGGGATTAA
CGGCATCCTCGCCTTCTTGGCGATGCTGTCGATTAACCTAGGGATCGTTAACCTGATTCCGATCCCGGCCTTAGACGGGG
GGAAGCTCCTCTTAAACATTGTCGAAGGCATCATTCGCCGGCCAATTCCCGAAAAAGTGGAGGGGATTTTGAATTTGGCT
GGCTTTGCCCTCTTGATGATCCTGATGGTCCTTGTGACCTATAACGACATTCAACGCTACTTTATCCATTAA

Domains


Predicted by InterproScan.

(7-408)

(209-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.113

100

0.482

  eeP Streptococcus thermophilus LMD-9

48.113

100

0.482