Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   MU539_RS07340 Genome accession   NZ_CP095384
Coordinates   1549631..1550872 (-) Length   413 a.a.
NCBI ID   WP_032960144.1    Uniprot ID   -
Organism   Lacticaseibacillus rhamnosus strain VHProbi M14     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1544631..1555872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MU539_RS07335 (MU539_07315) - 1547877..1549607 (-) 1731 WP_005711690.1 proline--tRNA ligase -
  MU539_RS07340 (MU539_07320) eeP 1549631..1550872 (-) 1242 WP_032960144.1 RIP metalloprotease RseP Regulator
  MU539_RS07345 (MU539_07325) - 1550889..1551677 (-) 789 WP_005711688.1 phosphatidate cytidylyltransferase -
  MU539_RS07350 (MU539_07330) - 1551713..1552465 (-) 753 WP_033571399.1 isoprenyl transferase -
  MU539_RS07355 (MU539_07335) frr 1552958..1553515 (-) 558 WP_005684323.1 ribosome recycling factor -
  MU539_RS07360 (MU539_07340) pyrH 1553515..1554234 (-) 720 WP_005684324.1 UMP kinase -
  MU539_RS07365 (MU539_07345) tsf 1554725..1555606 (-) 882 WP_005684325.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45291.87 Da        Isoelectric Point: 7.5092

>NTDB_id=676625 MU539_RS07340 WP_032960144.1 1549631..1550872(-) (eeP) [Lacticaseibacillus rhamnosus strain VHProbi M14]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSIILNDAGKVTRINASDKTTLTGGMPVQVSHVDLVKDLVIEGYPNGDEEKLERWSVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLIVNFAGPMNNFILAILTFIIYGLMFGVQVLNTNQIGTVLPGYPAAQAGLKSNATIQAIDGEKIHSFTDL
SSKVSKQAGKSVTFTVKEHGKTQNVVIKPNKDGKIGVEALIEKSPARAFTYGFTQTWDLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGLQGLLFFMGYLSLGLGISNLLPIPVLDGGKILLNLIELIRRKPLKPETEGVVTMVGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=676625 MU539_RS07340 WP_032960144.1 1549631..1550872(-) (eeP) [Lacticaseibacillus rhamnosus strain VHProbi M14]
ATGACCACAATCATTGCCTTTATTGTTATCTTCTGCATTCTTGTGGTGGTTCACGAGTTTGGCCATTTTTATTTTGCCAA
GCGCAGCGGAATATTAGTGCGTGAGTTTTCGATTGGCATGGGGCCTAAGCTATGGGCGTCACATAAGAATAATACGACCT
ATACCTTGCGCTTGTTGCCACTGGGCGGATATGTACGTATGGCTGGCTGGCAGGATGAGGAAGATGAAATCAAGCCTGGG
ACCATGCTGAGTATTATCCTGAATGATGCCGGTAAAGTGACACGGATTAATGCCAGTGATAAAACGACGCTGACAGGTGG
CATGCCGGTACAAGTAAGCCACGTAGACCTCGTTAAAGACTTGGTGATTGAAGGCTACCCTAATGGCGACGAAGAGAAAC
TGGAGCGTTGGTCGGTTGACCATGATGCCACGATTATTGAAGAAGATGGCACCGAAGTTCAAATTGCGCCAGAAGATGTC
CAATTTCAAAATGCTCCGGTTTGGCGGCGTCTAATTGTTAACTTTGCCGGTCCGATGAATAATTTTATTCTTGCCATTTT
GACCTTTATTATTTACGGTTTGATGTTTGGCGTGCAGGTCTTAAATACCAATCAAATCGGAACGGTACTGCCCGGTTATC
CTGCTGCTCAAGCCGGGCTTAAGTCCAATGCCACAATTCAGGCGATTGATGGTGAAAAAATCCATTCTTTTACTGATCTT
TCCAGTAAAGTCAGCAAACAAGCCGGTAAGTCGGTGACGTTTACAGTTAAAGAGCATGGCAAAACGCAAAATGTGGTCAT
CAAGCCTAACAAGGATGGCAAGATCGGTGTGGAAGCACTCATCGAAAAATCACCGGCACGGGCGTTTACGTATGGTTTCA
CCCAAACCTGGGATTTAGCTGTGCGCACTTGGGATGTCCTCAAATCCATGGTGACTGGCGGCTTTTCGCTTAATAAGTTA
GCTGGGCCGGTCGGGATTTATACCATGACCAGTCAAAGTGCTAAAGGCGGATTGCAGGGATTGCTATTCTTTATGGGATA
CTTAAGCCTCGGCTTGGGAATCAGCAATTTGTTGCCAATCCCGGTTCTGGATGGTGGTAAAATTTTACTGAATCTCATTG
AACTGATTCGGCGCAAACCGTTGAAGCCTGAAACAGAAGGTGTTGTCACTATGGTTGGCCTCGGTTTGATGGTGCTCCTG
ATGCTCGCCGTGACGATTAATGATATTATGCGTTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-257)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.057

100

0.504
  eeP Streptococcus thermophilus LMD-9

48.821

100

0.501