Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHA86_RS15610 Genome accession   NZ_CP109445
Coordinates   3785584..3786642 (+) Length   352 a.a.
NCBI ID   WP_329182423.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01477     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3780584..3791642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA86_RS15590 (OHA86_15635) - 3780741..3781013 (-) 273 WP_329175890.1 helix-turn-helix transcriptional regulator -
  OHA86_RS15595 (OHA86_15640) map 3781064..3781831 (+) 768 WP_329175891.1 type I methionyl aminopeptidase -
  OHA86_RS15600 (OHA86_15645) - 3782090..3783718 (-) 1629 WP_329175892.1 hypothetical protein -
  OHA86_RS15605 (OHA86_15650) radA/sms 3784016..3785401 (+) 1386 WP_329175893.1 DNA repair protein RadA Machinery gene
  OHA86_RS15610 (OHA86_15655) disA 3785584..3786642 (+) 1059 WP_329182423.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA86_RS15615 (OHA86_15660) - 3786749..3787636 (-) 888 WP_329175895.1 hypothetical protein -
  OHA86_RS15620 (OHA86_15665) - 3787767..3788708 (+) 942 WP_329175897.1 A/G-specific adenine glycosylase -
  OHA86_RS15625 (OHA86_15670) - 3789011..3789541 (+) 531 WP_329175899.1 SigE family RNA polymerase sigma factor -
  OHA86_RS15630 (OHA86_15675) - 3789559..3790236 (+) 678 WP_329175900.1 hypothetical protein -
  OHA86_RS15635 (OHA86_15680) cseB 3790240..3790923 (+) 684 WP_329175902.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 352 a.a.        Molecular weight: 38312.00 Da        Isoelectric Point: 4.9115

>NTDB_id=676435 OHA86_RS15610 WP_329182423.1 3785584..3786642(+) (disA) [Streptomyces sp. NBC_01477]
MRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESLCSGGFVLDVEFTATRLRELCKLDGALILDKDMTKIMRAG
VQLVPDPTIPTEETGTRHRTADRVSKQVNFPVVSVSQSMRLIALYVDGQRRVLEDSAAILSRANQALATLERYKLRLDEV
AGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIAGVEPERELVARDYVPEPTAKRS
RTVGEAMAELDALPQSELIELTTVARALGYTGSPESLDSAVSPRGYRLLAKVPRLPNTVIERLVEHFGGLQKLLAASVDD
LQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=676435 OHA86_RS15610 WP_329182423.1 3785584..3786642(+) (disA) [Streptomyces sp. NBC_01477]
ATGCGCGCGTCGCTGAGCGCCGTCGCGCCCGGCACGGCCCTGCGCGACGGCCTGGAGCGCATTCTGCGCGGCAATACGGG
CGGCCTGATCGTGCTGGGCATGGACAAGACGGTGGAGTCGCTGTGCTCCGGCGGCTTCGTCCTCGACGTGGAATTCACCG
CGACCCGGCTGCGTGAGCTGTGCAAGCTGGACGGTGCGCTGATCCTGGACAAGGACATGACCAAGATCATGCGGGCCGGG
GTGCAGTTGGTGCCCGACCCGACGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTCAGCAAGCA
GGTCAACTTCCCCGTGGTCTCGGTCAGTCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGTCAGCGCCGGGTGCTGG
AGGACTCGGCGGCGATCCTGTCCCGGGCCAACCAGGCGCTGGCCACCCTTGAGCGGTACAAACTGCGGCTGGACGAGGTG
GCGGGCACCCTGTCGGCGCTGGAGATCGAGGACCTGGTCACGGTCCGCGATGTCACGGCGGTGGCGCAGCGGTTGGAGAT
GGTCCGCCGGATCGCCACCGAAATCGCCGAGTACGTCGTGGAGTTGGGTACCGACGGGCGGCTGCTGTCGCTCCAGCTGG
ACGAGCTGATCGCGGGTGTGGAGCCGGAACGCGAGCTGGTGGCCCGGGACTACGTACCGGAGCCGACCGCCAAGCGCAGC
CGTACGGTCGGCGAGGCGATGGCCGAGCTGGACGCGCTGCCGCAGAGCGAGCTGATCGAACTGACCACGGTGGCGCGGGC
GTTGGGCTACACCGGCTCCCCCGAGTCGCTGGACTCGGCGGTGTCGCCGCGGGGTTACCGCCTGCTGGCGAAGGTGCCGC
GGCTGCCGAACACGGTGATCGAGCGGCTGGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCCAGCGTGGACGAC
CTCCAGGCGGTCGACGGCGTCGGCGAGGCCCGCGCCCGCTCGGTCCGCGAGGGCCTGTCGCGTCTCGCGGAGTCCTCGAT
CCTCGAACGGTACGTGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.665

98.295

0.449