Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG223_RS30160 Genome accession   NZ_CP109444
Coordinates   6656898..6658022 (-) Length   374 a.a.
NCBI ID   WP_329255323.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01478     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6651898..6663022
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG223_RS30135 (OG223_30145) cseB 6652487..6653194 (-) 708 WP_329255315.1 two-component system response regulator CseB -
  OG223_RS30140 (OG223_30150) - 6653318..6653911 (-) 594 WP_329265553.1 hypothetical protein -
  OG223_RS30145 (OG223_30155) - 6653995..6654534 (-) 540 WP_019064956.1 SigE family RNA polymerase sigma factor -
  OG223_RS30150 (OG223_30160) - 6654834..6655775 (-) 942 WP_329255318.1 A/G-specific adenine glycosylase -
  OG223_RS30155 (OG223_30165) - 6656064..6656885 (+) 822 WP_329255321.1 hypothetical protein -
  OG223_RS30160 (OG223_30170) disA 6656898..6658022 (-) 1125 WP_329255323.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG223_RS30165 (OG223_30175) radA/sms 6658105..6659514 (-) 1410 WP_329255325.1 DNA repair protein RadA Machinery gene
  OG223_RS30170 (OG223_30180) - 6659713..6661422 (+) 1710 WP_329255329.1 hypothetical protein -
  OG223_RS30175 (OG223_30185) - 6661427..6662293 (-) 867 WP_329255332.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40032.83 Da        Isoelectric Point: 4.9166

>NTDB_id=676355 OG223_RS30160 WP_329255323.1 6656898..6658022(-) (disA) [Streptomyces sp. NBC_01478]
MAANDRASAPGKSGGSSGADGLMRASLSAVAPGQALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFILDVEFTATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPNIPTEETGTRHRTADRVSKQVAFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVVQRLEMVRLIATEIAEYVLELGTDGRLLALQLEELIA
GVEPERELVVRDYVPEPTAKRSRTVNEALAELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=676355 OG223_RS30160 WP_329255323.1 6656898..6658022(-) (disA) [Streptomyces sp. NBC_01478]
GTGGCAGCCAACGACCGGGCGTCAGCTCCCGGAAAGTCCGGCGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCCCT
GAGCGCCGTGGCACCCGGCCAGGCCCTGCGCGACGGCCTGGAGCGGATTCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGTTCCGACAAGACCGTGGAAGCGATGTGCACAGGCGGTTTCATCCTGGACGTGGAGTTCACGGCCACCCGCCTACGC
GAACTCTGCAAACTGGACGGCGGCATCGTCGTCTCGTCCGACCTCTCCAAGATCCTCCGCGCGGGCGTCCAACTGGTCCC
CGACCCGAACATCCCCACCGAGGAGACAGGCACCCGCCACCGCACGGCGGACCGAGTCAGCAAACAGGTGGCCTTCCCGG
TCGTCTCGGTATCCCAGTCCATGCGCCTGATCGCCCTCTACGTGGACGGCCAACGCCGCGTCCTGGAGGACTCCGCGGCA
ATCCTGTCCCGCGCGAACCAAGCCCTGGCCACCCTGGAGCGCTACAAACTCCGCCTGGACGAGGTGGCGGGAACACTGTC
GGCCCTGGAGATCGAGGACCTCGTCACGGTCCGAGACGTATCGGCAGTGGTCCAACGCCTGGAAATGGTGCGCCTGATCG
CCACCGAGATCGCCGAGTACGTACTGGAGTTGGGCACCGACGGCCGCCTGCTCGCCCTCCAGTTGGAGGAGTTGATCGCA
GGCGTGGAGCCGGAACGCGAACTGGTGGTGCGCGACTACGTCCCCGAACCCACGGCAAAACGCTCCCGCACGGTGAACGA
AGCCCTGGCCGAACTCGACGCGCTCTCCCACGCCGAACTCCTCGAACTCCCCACAGTGGCCCGCGCGTTGGGCTACACCG
GCTCCCCCGAGGCCCTCGACTCGGCGGTCTCCCCCCGAGGCTTCCGCCTCCTGGCCAAGGTCCCGCGCCTCCCCGGCGCG
ATCATCGACCGCCTGGTGGAACACTTCGGCGGCCTGCAAAAACTCCTGGCAGCAAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTAGGCGAGGCAAGGGCAAGAAGCGTACGAGAGGGCCTCTCCCGCCTGGCGGAATCCTCAATCCTGGAGCGCTACG
TATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.321

96.524

0.428