Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   MUY23_RS10905 Genome accession   NZ_CP095162
Coordinates   2214624..2215388 (-) Length   254 a.a.
NCBI ID   WP_004194534.1    Uniprot ID   A0A126UJW8
Organism   Streptococcus suis strain TJS75     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2209624..2220388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUY23_RS10880 - 2209951..2210316 (-) 366 WP_004194339.1 helix-turn-helix transcriptional regulator -
  MUY23_RS10885 - 2210420..2210623 (-) 204 WP_004194541.1 DUF951 family protein -
  MUY23_RS10890 - 2210633..2211514 (-) 882 WP_004194540.1 diacylglycerol kinase family protein -
  MUY23_RS10895 dnaN 2211758..2212894 (-) 1137 WP_004194538.1 DNA polymerase III subunit beta -
  MUY23_RS10900 dnaA 2213048..2214421 (-) 1374 WP_004194536.1 chromosomal replication initiator protein DnaA -
  MUY23_RS10905 spo0J 2214624..2215388 (-) 765 WP_004194534.1 ParB/RepB/Spo0J family partition protein Regulator
  MUY23_RS10910 htrA 2215449..2216645 (-) 1197 WP_009911075.1 trypsin-like peptidase domain-containing protein Regulator
  MUY23_RS10915 rlmH 2216819..2217298 (+) 480 WP_004194528.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  MUY23_RS10920 - 2217323..2218006 (+) 684 WP_004194526.1 YoaK family protein -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 28993.28 Da        Isoelectric Point: 9.4760

>NTDB_id=675861 MUY23_RS10905 WP_004194534.1 2214624..2215388(-) (spo0J) [Streptococcus suis strain TJS75]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRINF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=675861 MUY23_RS10905 WP_004194534.1 2214624..2215388(-) (spo0J) [Streptococcus suis strain TJS75]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCTATTAAGGAAAATGGCTTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAGGAA
CTAACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTGCAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACACATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGAAAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAGGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAACTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-94)

HTH domain found in ParB protein (HTH_ParB)

(146-193)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A126UJW8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.762

99.213

0.543