Detailed information NTG0067569

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: GR930_RS01015
• Genome accession: NZ_AP022351
• Coordinates: 209990..211015 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain E138
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 204990..216015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GR930_RS00985 (RIMDOsaka138_01780)	zapB	205074..205319 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
GR930_RS00990 (RIMDOsaka138_01790)	rraA	205404..205889 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
GR930_RS00995 (RIMDOsaka138_01800)	menA	205982..206908 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
GR930_RS01000 (RIMDOsaka138_01810)	hslU	206975..208306 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
GR930_RS01005 (RIMDOsaka138_01820)	hslV	208316..208846 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
GR930_RS01010 (RIMDOsaka138_01830)	ftsN	208939..209898 (-)	960	WP_000068834.1	cell division protein FtsN	-
GR930_RS01015 (RIMDOsaka138_01840)	cytR	209990..211015 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
GR930_RS01020 (RIMDOsaka138_01850)	priA	211171..213369 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
GR930_RS01025 (RIMDOsaka138_01860)	rpmE	213572..213784 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
GR930_RS01030 (RIMDOsaka138_01870)	yiiX	213845..214453 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
GR930_RS01035 (RIMDOsaka138_01880)	metJ	214513..214830 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=67569 GR930_RS01015 WP_000644908.1 209990..211015(-) (cytR) [Escherichia coli strain E138]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=67569 GR930_RS01015 WP_000644908.1 209990..211015(-) (cytR) [Escherichia coli strain E138]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625